CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69428	Canola	plastid	51.04	36.84
CDX83759	Canola	cytosol	36.46	36.27
CDX96659	Canola	cytosol	35.42	35.98
CDX85490	Canola	mitochondrion	46.35	34.63
CDY37249	Canola	cytosol	38.02	34.11
CDY29420	Canola	cytosol	36.98	33.33
CDY39369	Canola	cytosol	36.98	33.33
CDY62535	Canola	cytosol	36.98	33.18
KRH30940	Soybean	nucleus	43.23	32.05
KRG97934	Soybean	nucleus	43.23	31.8
PGSC0003DMT400040588	Potato	cytosol, plastid	41.67	29.85
Os06t0232600-01	Rice	extracellular, plasma membrane	42.19	29.78
KXG19661	Sorghum	plastid	40.62	29.77
Solyc11g011250.1.1	Tomato	plastid	41.15	29.48
Zm00001d037240_P001	Maize	plastid	40.62	29.0
VIT_14s0006g00630.t01	Wine grape	plastid	42.71	28.37
CDY37653	Canola	cytosol	8.85	27.87
TraesCS7B01G095600.2	Wheat	plastid	38.02	27.76
TraesCS7D01G191700.1	Wheat	plastid	38.02	27.76
TraesCS7A01G190700.1	Wheat	plastid	36.98	27.0
GSMUA_Achr7P18780_001	Banana	mitochondrion	39.58	23.46
HORVU7Hr1G038770.22	Barley	mitochondrion	38.02	22.74
CDY33899	Canola	cytosol, mitochondrion, plastid	13.54	12.68
CDY65006	Canola	extracellular	3.12	9.23

Protein Annotations

MapMan:2.4.6.3.2	Gene3D:3.40.30.10	GO:A0A078FD50	UniProt:A0A078FD50	InterPro:ATP11	EnsemblPlants:CDY10902
ProteinID:CDY10902	ProteinID:CDY10902.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006461	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	GO:GO:0065003	EnsemblPlantsGene:GSBRNA2T00048809001	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
PFAM:PF06644	PFAM:PF13417	PFscan:PS50404	PANTHER:PTHR44420	PANTHER:PTHR44420:SF1	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE582B	:	:	:	:

Description

BnaC01g15170DBnaC01g15170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD50]

Coordinates

chrLK032007:-:805153..808899

Molecular Weight (calculated)

22016.6 Da

IEP (calculated)

6.279

GRAVY (calculated)

-0.221

Length

192 amino acids

Sequence
(BLAST)

001: MTSSLKGRIR SPGVMPFFGK TVVVCCPFCQ RVLLTMEEKH VPYDMKMVDL SNKPEWFLKI SAEGKVPVVK FDEKWVPDSD VITQTLEDKY PEPPLATPPE
101: KASVGSKIFS TFIGLIATHD FHRLEDYKAR GTQAAPYLTS TFYIELSETK DLVFIRGDVV FISKLTDEEA KWIMETAQSF YLNDTRYKLL ER

Best Arabidopsis Sequence Match ( AT2G34050.1 )
(BLAST)

001: MRRIVGSISS LAKDKLSSSS YSSSRQIFTA RSSSWQRDAS SKLSEASLPG NHIKWASLGS VRNSRFASGF TPLQQKPLDS IMDLARAKTK SPEELTSIWD
101: DYHLGRGHIG LTMKAQLYRL LEQRASECRY FVIPLWRGNG YITMFAQVEA PHMIFTGLED YKARGTQAAP YLTTTFYTEL SETKDLVFIR GDVVFTSKLT
201: DEEAKWIMET AQSFYLNDSR YKLLERFNKH THDFEFKDVL QALDMPLL

Arabidopsis Description

ATP synthase F1 complex assembly factor [Source:UniProtKB/TrEMBL;Acc:O22958]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.