Factsheet for HORVU7Hr1G038770.22

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16710.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G191700.1	Wheat	plastid	79.75	97.34
TraesCS7A01G190700.1	Wheat	plastid	79.44	96.96
TraesCS7B01G095600.2	Wheat	plastid	78.82	96.2
KXG19661	Sorghum	plastid	65.73	80.53
Zm00001d037240_P001	Maize	plastid	65.11	77.7
Os06t0232600-01	Rice	extracellular, plasma membrane	61.37	72.43
Bra023579.1-P	Field mustard	cytosol	39.56	69.4
AT5G16710.1	Thale cress	plastid	50.78	63.18
CDX85490	Canola	mitochondrion	47.66	59.53
PGSC0003DMT400040588	Potato	cytosol, plastid	49.22	58.96
CDX69428	Canola	plastid	48.6	58.65
KRH30940	Soybean	nucleus	47.04	58.3
KRG97934	Soybean	nucleus	47.04	57.85
Solyc11g011250.1.1	Tomato	plastid	47.66	57.09
GSMUA_Achr7P18780_001	Banana	mitochondrion	57.01	56.48
VIT_14s0006g00630.t01	Wine grape	plastid	43.61	48.44
HORVU1Hr1G008120.1	Barley	extracellular	40.81	42.53
CDY10902	Canola	mitochondrion	22.74	38.02
CDY33899	Canola	cytosol, mitochondrion, plastid	12.77	20.0
Bra020633.1-P	Field mustard	cytosol, mitochondrion	14.95	13.71

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	UniProt:A0A287W4I1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	EnsemblPlantsGene:HORVU7Hr1G038770	EnsemblPlants:HORVU7Hr1G038770.22
InterPro:IPR004045	InterPro:IPR010987	PFAM:PF13410	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR44420	PANTHER:PTHR44420:SF1	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000B480A42
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:99551397..99568348

Molecular Weight (calculated)

35802.1 Da

IEP (calculated)

10.267

GRAVY (calculated)

-0.328

Length

321 amino acids

Sequence
(BLAST)

001: LHALHRKPAT RSLWTRRRTG IRRKRTYHAR RDKLPAASTF PPTARRRLTP ETTLEDLLMA VLLRTTSCAA ATTAGSSSTL LATTFRRDRR LLPSRASPAR
101: RAFTTRASAE PLEVCAKASI TVPDRLGDCP FTQRVLLTIE EKNLPYELKL VDLANKPDWL FTINPEGKVP IVKLEDKWVA DSDVITQVLE EKYPQPSLAT
201: PPEKASIGSK IFSTFIGFLK SKDTNDGTEQ TLLSELTSFD SYLKDNGPFI NGGTISAADL SLAPKLYHME IALGHYKNWS VPDALAHVKT YMKTIFSMDS
301: FVNTRGLPED VIAGWRSKVM G

Best Arabidopsis Sequence Match ( AT5G16710.1 )
(BLAST)

001: MISLRFQPST TAGVLSASVS RAGFIKRCGS TKPGRVGRFV TMATAASPLE ICVKASITTP NKLGDCPFCQ KVLLTMEEKN VPYDMKMVDL SNKPEWFLKI
101: SPEGKVPVVK FDEKWVPDSD VITQALEEKY PEPPLATPPE KASVGSKIFS TFVGFLKSKD SGDGTEQVLL DELTTFNDYI KDNGPFINGE KISAADLSLA
201: PKLYHMKIAL GHYKNWSVPD SLPFVKSYME NVFSRESFTN TRAETEDVIA GWRPKVMG

Arabidopsis Description

DHAR3DHAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UIL9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.