Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0116100-01 | Rice | extracellular | 75.83 | 85.45 |
| EES18912 | Sorghum | cytosol | 72.5 | 81.31 |
| Zm00001d035595_P003 | Maize | cytosol | 71.25 | 79.53 |
| Zm00001d011034_P004 | Maize | cytosol | 70.83 | 79.07 |
| GSMUA_Achr11P... | Banana | cytosol, unclear | 65.0 | 71.56 |
| Solyc05g054760.2.1 | Tomato | extracellular | 60.0 | 68.57 |
| KRH36212 | Soybean | cytosol, mitochondrion, nucleus | 60.83 | 68.54 |
| PGSC0003DMT400060193 | Potato | cytosol | 59.58 | 68.1 |
| KRG92962 | Soybean | mitochondrion | 60.42 | 68.08 |
| AT1G75270.1 | Thale cress | cytosol | 60.42 | 68.08 |
| Bra025749.1-P | Field mustard | cytosol | 60.0 | 67.61 |
| CDY29420 | Canola | cytosol | 60.0 | 67.61 |
| CDY39369 | Canola | cytosol | 60.0 | 67.61 |
| TraesCS1A01G045700.1 | Wheat | golgi | 85.42 | 65.92 |
| VIT_00s0317g00050.t01 | Wine grape | cytosol | 57.92 | 65.57 |
| CDX83759 | Canola | cytosol | 52.5 | 65.28 |
| HORVU1Hr1G008120.1 | Barley | extracellular | 83.33 | 64.94 |
| Bra008188.1-P | Field mustard | cytosol | 57.5 | 64.49 |
| Bra016503.1-P | Field mustard | cytosol | 56.25 | 64.29 |
| CDX96659 | Canola | cytosol | 50.42 | 64.02 |
| CDY62535 | Canola | cytosol | 57.08 | 64.02 |
| CDY37249 | Canola | cytosol | 56.67 | 63.55 |
| Zm00001d011035_P001 | Maize | endoplasmic reticulum | 70.0 | 63.4 |
| AT1G19570.1 | Thale cress | cytosol | 55.0 | 61.97 |
| OQU77257 | Sorghum | plastid | 70.42 | 58.28 |
| CDY37653 | Canola | cytosol | 14.58 | 57.38 |
| GSMUA_Achr11P... | Banana | plastid | 65.83 | 57.04 |
| AT1G19550.1 | Thale cress | cytosol | 35.42 | 55.56 |
| Solyc11g039930.1.1 | Tomato | cytosol | 21.25 | 53.68 |
| Bra035356.1-P | Field mustard | cytosol | 22.08 | 51.96 |
| Solyc06g075520.2.1 | Tomato | cytosol | 21.67 | 47.27 |
| Solyc09g056180.2.1 | Tomato | cytosol | 20.0 | 46.6 |
| VIT_00s0317g00040.t01 | Wine grape | vacuole | 7.92 | 46.34 |
| CDY65006 | Canola | extracellular | 12.5 | 46.15 |
| Solyc05g013950.1.1 | Tomato | plastid | 26.67 | 45.39 |
| TraesCS7B01G095600.2 | Wheat | plastid | 49.58 | 45.25 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:10.4.1.3 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0033355 | GO:GO:0045174 | GO:GO:0098869 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N |
| InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF13410 | PFAM:PF13417 | PFscan:PS50404 | PFscan:PS50405 |
| PANTHER:PTHR44420 | PANTHER:PTHR44420:SF2 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS1B01G059100 |
| EnsemblPlants:TraesCS1B01G059100.1 | TIGR:cd00570 | TIGR:cd03201 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:41739957..41744355
Molecular Weight (calculated)
26361.6 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.121
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVCVKAAV GHPDTLGDCP FSQRVLLTLE EKKVPYQMKL IDSSAGLGIL LWSPWVRPVR RLDACCECDR FGLSSAEFLK INPEGKVPVY NGGDGKWIAD
101: SDVITQVIEE KYPTPSLVTP PEYASVGSKI FSTFVTFLKS KDASDGSEKA LVDELQALEE HLKAHGPYIN GANISAVDLS LAPKLYHLQV ALEHFKGWKV
201: PETLTSVHAY TEALFSRESF VKTKATKENL IAGWAPKVNP
101: SDVITQVIEE KYPTPSLVTP PEYASVGSKI FSTFVTFLKS KDASDGSEKA LVDELQALEE HLKAHGPYIN GANISAVDLS LAPKLYHLQV ALEHFKGWKV
201: PETLTSVHAY TEALFSRESF VKTKATKENL IAGWAPKVNP
001: MALDICVKVA VGAPDVLGDC PFSQRVLLTL EEKKLPYKTH LINVSDKPQW FLDISPEGKV PVVKLDGKWV ADSDVIVGLL EEKYPEPSLK TPPEFASVGS
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA
Arabidopsis Description
DHAR2Glutathione S-transferase DHAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.