Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| golgi:
23128297
golgi: 25769308 unclear: 25769308 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0116100-01 | Rice | extracellular | 59.81 | 87.32 |
| TraesCS1B01G059100.1 | Wheat | cytosol | 65.92 | 85.42 |
| EES18912 | Sorghum | cytosol | 56.59 | 82.24 |
| Zm00001d035595_P003 | Maize | cytosol | 55.95 | 80.93 |
| Zm00001d011034_P004 | Maize | cytosol | 55.31 | 80.0 |
| HORVU1Hr1G008120.1 | Barley | extracellular | 76.85 | 77.6 |
| GSMUA_Achr11P... | Banana | cytosol, unclear | 51.45 | 73.39 |
| Solyc05g054760.2.1 | Tomato | extracellular | 46.95 | 69.52 |
| PGSC0003DMT400060193 | Potato | cytosol | 46.62 | 69.05 |
| KRH36212 | Soybean | cytosol, mitochondrion, nucleus | 47.27 | 69.01 |
| KRG92962 | Soybean | mitochondrion | 47.27 | 69.01 |
| AT1G75270.1 | Thale cress | cytosol | 47.27 | 69.01 |
| Bra025749.1-P | Field mustard | cytosol | 46.62 | 68.08 |
| CDY39369 | Canola | cytosol | 46.62 | 68.08 |
| CDY29420 | Canola | cytosol | 46.62 | 68.08 |
| VIT_00s0317g00050.t01 | Wine grape | cytosol | 45.34 | 66.51 |
| Zm00001d011035_P001 | Maize | endoplasmic reticulum | 56.27 | 66.04 |
| CDX83759 | Canola | cytosol | 40.84 | 65.8 |
| Bra008188.1-P | Field mustard | cytosol | 45.02 | 65.42 |
| CDY62535 | Canola | cytosol | 44.69 | 64.95 |
| Bra016503.1-P | Field mustard | cytosol | 43.73 | 64.76 |
| CDX96659 | Canola | cytosol | 39.23 | 64.55 |
| CDY37249 | Canola | cytosol | 44.37 | 64.49 |
| AT1G19570.1 | Thale cress | cytosol | 43.41 | 63.38 |
| OQU77257 | Sorghum | plastid | 56.59 | 60.69 |
| GSMUA_Achr11P... | Banana | plastid | 53.38 | 59.93 |
| AT1G19550.1 | Thale cress | cytosol | 27.65 | 56.21 |
| CDY37653 | Canola | cytosol | 10.93 | 55.74 |
| Solyc11g039930.1.1 | Tomato | cytosol | 16.4 | 53.68 |
| Bra035356.1-P | Field mustard | cytosol | 17.04 | 51.96 |
| TraesCS7A01G190700.1 | Wheat | plastid | 41.48 | 49.05 |
| Solyc06g075520.2.1 | Tomato | cytosol | 16.72 | 47.27 |
| Solyc09g056180.2.1 | Tomato | cytosol | 15.43 | 46.6 |
| VIT_00s0317g00040.t01 | Wine grape | vacuole | 6.11 | 46.34 |
| CDY65006 | Canola | extracellular | 9.65 | 46.15 |
| Solyc05g013950.1.1 | Tomato | plastid | 20.58 | 45.39 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:10.4.1.3 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0033355 | GO:GO:0045174 | GO:GO:0098869 | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N |
| InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF13410 | PFAM:PF13417 | PFscan:PS50404 | PFscan:PS50405 |
| PANTHER:PTHR44420 | PANTHER:PTHR44420:SF2 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS1A01G045700 |
| EnsemblPlants:TraesCS1A01G045700.1 | TIGR:cd00570 | TIGR:cd03201 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1A:+:27249177..27253415
Molecular Weight (calculated)
33705.5 Da
IEP (calculated)
9.098
GRAVY (calculated)
-0.200
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTLPCFTTP PQPPPTRPVR SGPVPAPEVS RTRTTTATRA RMAGSRPSRA ATSGETCSHH PLINTGAPKP RRRSTALALS TFLLLVLLTG LPDAAVAANM
101: TEVCVKAAVG HPDTLGDCPF SQRVLLTLEE KKVPYQMKLI DVSNKPDWFL KINPEGKVPV YNGGDGKWIA DSDVITQVIE EKYPTPSLVT PAEYASVGSK
201: IFSTFVTFLK SKDASDGSEK ALVDELQALE EHLKAHGPYI NGANISAVDL SLAPKLYHLQ VALEHFKGWK VPETLTSVHA YTEALFSRES FVKTKATKEN
301: LIAGWAPKVN P
101: TEVCVKAAVG HPDTLGDCPF SQRVLLTLEE KKVPYQMKLI DVSNKPDWFL KINPEGKVPV YNGGDGKWIA DSDVITQVIE EKYPTPSLVT PAEYASVGSK
201: IFSTFVTFLK SKDASDGSEK ALVDELQALE EHLKAHGPYI NGANISAVDL SLAPKLYHLQ VALEHFKGWK VPETLTSVHA YTEALFSRES FVKTKATKEN
301: LIAGWAPKVN P
001: MALDICVKVA VGAPDVLGDC PFSQRVLLTL EEKKLPYKTH LINVSDKPQW FLDISPEGKV PVVKLDGKWV ADSDVIVGLL EEKYPEPSLK TPPEFASVGS
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA
Arabidopsis Description
DHAR2Glutathione S-transferase DHAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRL8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.