Factsheet for GSMUA_Achr11P24710_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr4P17780_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G19570.1	GSMUA_Achr11P...	AT2G31790.1	21798944
AT1G19570.1	GSMUA_Achr4P17780_001	AT2G31790.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, unclear	67.87	86.24
EES18912	Sorghum	cytosol	58.12	75.23
Os05t0116100-01	Rice	extracellular	57.04	74.18
Zm00001d035595_P003	Maize	cytosol	56.68	73.02
Zm00001d011034_P004	Maize	cytosol	56.68	73.02
KRG92962	Soybean	mitochondrion	55.23	71.83
KRH36212	Soybean	cytosol, mitochondrion, nucleus	54.87	71.36
GSMUA_Achr6P34340_001	Banana	cytosol	54.51	68.64
VIT_00s0317g00050.t01	Wine grape	cytosol	52.35	68.4
AT1G75270.1	Thale cress	cytosol	52.35	68.08
PGSC0003DMT400060193	Potato	cytosol	51.26	67.62
Solyc05g054760.2.1	Tomato	extracellular	50.9	67.14
TraesCS1B01G059100.1	Wheat	cytosol	57.04	65.83
Bra025749.1-P	Field mustard	cytosol	50.18	65.26
CDY29420	Canola	cytosol	50.18	65.26
CDY39369	Canola	cytosol	50.18	65.26
CDY62535	Canola	cytosol	50.18	64.95
CDX96659	Canola	cytosol	44.04	64.55
CDY37249	Canola	cytosol	49.46	64.02
CDY37653	Canola	cytosol	14.08	63.93
CDX83759	Canola	cytosol	44.4	63.73
Bra008188.1-P	Field mustard	cytosol	49.1	63.55
AT1G19570.1	Thale cress	cytosol	48.38	62.91
Bra016503.1-P	Field mustard	cytosol	47.29	62.38
Zm00001d011035_P001	Maize	endoplasmic reticulum	55.96	58.49
OQU77257	Sorghum	plastid	57.04	54.48
AT1G19550.1	Thale cress	cytosol	29.96	54.25
HORVU1Hr1G008120.1	Barley	extracellular	59.93	53.9
TraesCS1A01G045700.1	Wheat	golgi	59.93	53.38
Bra035356.1-P	Field mustard	cytosol	19.49	52.94
VIT_00s0317g00040.t01	Wine grape	vacuole	7.58	51.22
CDY65006	Canola	extracellular	11.91	50.77
Solyc11g039930.1.1	Tomato	cytosol	16.97	49.47
Solyc06g075520.2.1	Tomato	cytosol	18.05	45.45
GSMUA_Achr7P18780_001	Banana	mitochondrion	50.9	43.52
Solyc09g056180.2.1	Tomato	cytosol	15.88	42.72
Solyc05g013950.1.1	Tomato	plastid	21.3	41.84

Protein Annotations

Gene3D:1.20.1050.10	MapMan:10.4.1.3	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr11G24710_001	EnsemblPlants:GSMUA_Achr11P24710_001	EnsemblPlants:GSMUA_Achr11T24710_001	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M0RV51	PFAM:PF13417	PFscan:PS50404	PFscan:PS50405
PFscan:PS51257	PANTHER:PTHR44420	PANTHER:PTHR44420:SF2	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002954843	SEG:seg	:	:	:	:

Description

Glutathione S-transferase DHAR2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G24710_001]

Coordinates

chr11:+:24123452..24126818

Molecular Weight (calculated)

30380.6 Da

IEP (calculated)

7.002

GRAVY (calculated)

-0.040

Length

277 amino acids

Sequence
(BLAST)

001: MRSAGTPHPN SLLACHRNIQ TQTLVVAISV RSSPLSLHPL PTTPSCAKAF CLRIDPSSLA MAAVAAEVCV KAAVGAPDVL GDCPFSQRVL LTLEEKKIPY
101: DTKLIDVSNK PDWFLAISPE GKVPVYKLDD GKWAPDSDVI TQILEEKFPN PSLVAPQEYS SVGSKIFSSF IKFLKSKDAN DGLEQALVDE LHGLDEHLKQ
201: HGPYVNGENI SAVDLSLAPK LFHLIIVLDH FKGWKVPENL TYVHAYVKLL FSRESFVKTK PAKDEYVIAG WAPKVNA

Best Arabidopsis Sequence Match ( AT1G75270.1 )
(BLAST)

001: MALDICVKVA VGAPDVLGDC PFSQRVLLTL EEKKLPYKTH LINVSDKPQW FLDISPEGKV PVVKLDGKWV ADSDVIVGLL EEKYPEPSLK TPPEFASVGS
101: KIFGAFVTFL KSKDANDGSE KALVDELEAL ENHLKTHSGP FVAGEKITAV DLSLAPKLYH LEVALGHYKN WSVPESLTSV RNYAKALFSR ESFENTKAKK
201: EIVVAGWESK VNA

Arabidopsis Description

DHAR2Glutathione S-transferase DHAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.