Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra005641.1-P | |
| Bra021743.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G19570.1 | Bra005641.1-P | AT2G31790.1 | 21798944 |
| AT1G19570.1 | Bra021743.1-P | AT2G31790.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83759 | Canola | cytosol | 90.48 | 98.45 |
| Bra025749.1-P | Field mustard | cytosol | 81.43 | 80.28 |
| AT1G19570.1 | Thale cress | cytosol | 80.95 | 79.81 |
| Bra008188.1-P | Field mustard | cytosol | 74.76 | 73.36 |
| Solyc05g054760.2.1 | Tomato | extracellular | 73.33 | 73.33 |
| PGSC0003DMT400060193 | Potato | cytosol | 73.33 | 73.33 |
| AT1G19550.1 | Thale cress | cytosol | 52.38 | 71.9 |
| KRG92962 | Soybean | mitochondrion | 72.86 | 71.83 |
| KRH36212 | Soybean | cytosol, mitochondrion, nucleus | 72.38 | 71.36 |
| VIT_00s0317g00050.t01 | Wine grape | cytosol | 66.67 | 66.04 |
| Os05t0116100-01 | Rice | extracellular | 64.76 | 63.85 |
| GSMUA_Achr6P34340_001 | Banana | cytosol | 65.71 | 62.73 |
| EES18912 | Sorghum | cytosol | 62.86 | 61.68 |
| GSMUA_Achr11P... | Banana | cytosol, unclear | 63.81 | 61.47 |
| Zm00001d011034_P004 | Maize | cytosol | 60.48 | 59.07 |
| Zm00001d035595_P003 | Maize | cytosol | 60.0 | 58.6 |
| VIT_00s0317g00040.t01 | Wine grape | vacuole | 11.43 | 58.54 |
| Bra035356.1-P | Field mustard | cytosol | 28.1 | 57.84 |
| Bra023579.1-P | Field mustard | cytosol | 50.0 | 57.38 |
| TraesCS1B01G059100.1 | Wheat | cytosol | 64.29 | 56.25 |
| Solyc11g039930.1.1 | Tomato | cytosol | 24.29 | 53.68 |
| Zm00001d011035_P001 | Maize | endoplasmic reticulum | 63.33 | 50.19 |
| Solyc06g075520.2.1 | Tomato | cytosol | 25.24 | 48.18 |
| Solyc05g013950.1.1 | Tomato | plastid | 31.9 | 47.52 |
| GSMUA_Achr11P... | Banana | plastid | 62.38 | 47.29 |
| OQU77257 | Sorghum | plastid | 64.29 | 46.55 |
| Solyc09g056180.2.1 | Tomato | cytosol | 21.9 | 44.66 |
| HORVU1Hr1G008120.1 | Barley | extracellular | 64.29 | 43.83 |
| TraesCS1A01G045700.1 | Wheat | golgi | 64.76 | 43.73 |
| Bra020633.1-P | Field mustard | cytosol, mitochondrion | 18.1 | 10.86 |
Protein Annotations
| EnsemblPlants:Bra016503.1 | EnsemblPlants:Bra016503.1-P | EnsemblPlantsGene:Bra016503 | Gene3D:1.20.1050.10 | Gene3D:3.40.30.10 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:Thioredoxin-like_sf |
| PANTHER:PTHR44420 | PANTHER:PTHR44420:SF2 | PFAM:PF13410 | PFAM:PF13417 | PFscan:PS50404 | SEG:seg |
| SUPFAM:SSF47616 | SUPFAM:SSF52833 | UniParc:UPI0002546D46 | UniProt:M4DJ25 | MapMan:10.4.1.3 | : |
Description
AT1G19570 (E=3e-088) DHAR1, ATDHAR1 | DHAR1 (dehydroascorbate reductase); copper ion binding / glutathione dehydrogenase (ascorbate)
Coordinates
chrA08:+:18784347..18785279
Molecular Weight (calculated)
23196.2 Da
IEP (calculated)
7.404
GRAVY (calculated)
-0.047
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEVCVKAA VGAPDVLGDC PFSQRVLLTL EEKSLPYKMH LINLSDKPKW FLDINPGGKV PVLKIDGKWV PDSDVIVSLL EKKYPEPSLK TPPKFASVGS
101: KIMSTFVAFL TTKDSSDGPL LHELEALENH LKSHDGPFIA GEKVSAVDLS LAPKLYHLEV ALGHFKSWSV PGSLTHVHNY MHAVFSLHSF EKTKAEEKYV
201: IAGWAPKVHY
101: KIMSTFVAFL TTKDSSDGPL LHELEALENH LKSHDGPFIA GEKVSAVDLS LAPKLYHLEV ALGHFKSWSV PGSLTHVHNY MHAVFSLHSF EKTKAEEKYV
201: IAGWAPKVHY
001: MALEICVKAA VGAPDHLGDC PFSQRALLTL EEKSLTYKIH LINLSDKPQW FLDISPQGKV PVLKIDDKWV TDSDVIVGIL EEKYPDPPLK TPAEFASVGS
101: NIFGTFGTFL KSKDSNDGSE HALLVELEAL ENHLKSHDGP FIAGERVSAV DLSLAPKLYH LQVALGHFKS WSVPESFPHV HNYMKTLFSL DSFEKTKTEE
201: KYVISGWAPK VNP
101: NIFGTFGTFL KSKDSNDGSE HALLVELEAL ENHLKSHDGP FIAGERVSAV DLSLAPKLYH LQVALGHFKS WSVPESFPHV HNYMKTLFSL DSFEKTKTEE
201: KYVISGWAPK VNP
Arabidopsis Description
DHAR1Glutathione S-transferase DHAR1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FWR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.