CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES18912
KXG32375
OQU77257

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05680.1	EES18912	AT1G19570.1	21798944
AT1G05680.1	OQU77257	AT1G19570.1	21798944
AT2G31790.1	KXG32375	AT1G58330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38625	Sorghum	plastid	67.6	78.55
EER97052	Sorghum	cytosol, peroxisome, plastid	62.02	61.62
KXG36016	Sorghum	cytosol	47.85	59.31
EER99196	Sorghum	plastid	59.44	57.59
EER99195	Sorghum	plastid	55.58	55.46
GSMUA_Achr11P...	Banana	cytosol	45.49	54.08
VIT_05s0094g01020.t01	Wine grape	cytosol, nucleus, plastid	20.39	53.98
PGSC0003DMT400024641	Potato	cytosol	30.69	52.57
Solyc08g006360.1.1	Tomato	cytosol	25.11	52.23
EER97051	Sorghum	cytosol	54.51	51.42
Solyc05g006150.1.1	Tomato	cytosol, plastid	20.17	51.37
CDY69281	Canola	cytosol	25.97	51.05
CDX79438	Canola	cytosol, golgi, nucleus	26.39	50.62
Solyc05g006140.1.1	Tomato	cytosol	24.25	50.22
Solyc08g006380.2.1	Tomato	cytosol	29.61	50.18
PGSC0003DMT400024615	Potato	cytosol	33.69	49.06
CDY67861	Canola	extracellular, golgi	26.82	48.45
EES11834	Sorghum	plastid	48.07	47.56
VIT_05s0094g00990.t01	Wine grape	cytosol	46.57	47.38
VIT_05s0094g01060.t01	Wine grape	cytosol	29.83	47.12
VIT_05s0094g00960.t01	Wine grape	plastid	45.92	46.83
VIT_17s0000g07790.t01	Wine grape	cytosol, peroxisome, plastid	45.92	46.83
Solyc08g006410.2.1	Tomato	plastid	45.92	46.72
PGSC0003DMT400067684	Potato	plastid	46.14	46.54
PGSC0003DMT400024624	Potato	cytosol, golgi, plastid	45.49	46.39
EER92066	Sorghum	cytosol	47.64	46.35
Solyc08g006330.2.1	Tomato	plastid	45.28	46.27
Solyc08g006350.2.1	Tomato	plastid	45.28	46.27
CDX95572	Canola	cytosol, nucleus, peroxisome	38.63	46.04
Bra000330.1-P	Field mustard	mitochondrion	43.56	45.21
CDX83455	Canola	mitochondrion	43.35	44.99
CDY64614	Canola	mitochondrion	43.35	44.99
PGSC0003DMT400040247	Potato	cytosol, golgi, plastid	44.21	44.98
VIT_01s0026g00630.t01	Wine grape	cytosol, golgi, plastid	43.99	44.76
CDY15551	Canola	cytosol	36.05	44.68
CDY64613	Canola	mitochondrion	42.92	44.64
CDY70064	Canola	cytosol	39.7	44.47
CDY17908	Canola	cytosol	42.92	44.35
VIT_07s0151g00540.t01	Wine grape	cytosol	43.35	44.3
VIT_07s0289g00080.t01	Wine grape	cytosol	43.35	44.3
CDX83456	Canola	cytosol, golgi, plastid	42.49	44.3
PGSC0003DMT400067682	Potato	plastid	39.91	44.29
PGSC0003DMT400024622	Potato	cytosol, golgi, plastid	43.35	44.2
AT2G43820.1	Thale cress	cytosol, golgi, plastid	42.49	44.1
Bra000329.1-P	Field mustard	cytosol, golgi, plastid	42.27	44.07
CDY44260	Canola	cytosol, mitochondrion, peroxisome, plastid	41.85	44.02
CDX79797	Canola	mitochondrion, plastid	42.27	43.88
CDY65158	Canola	mitochondrion	42.27	43.88
KRH00992	Soybean	cytosol, golgi	32.19	43.86
KRH20372	Soybean	golgi	42.7	43.74
PGSC0003DMT400040295	Potato	cytosol, golgi, plastid	43.99	43.71
Bra004788.1-P	Field mustard	mitochondrion	40.13	43.69
Bra004787.1-P	Field mustard	cytosol, nucleus, peroxisome	42.27	43.68
CDX79798	Canola	cytosol, nucleus, peroxisome	42.27	43.68
OQU92304	Sorghum	plastid	43.35	43.63
Bra022864.1-P	Field mustard	cytosol	42.27	43.3
CDX84760	Canola	cytosol	42.27	43.3
VIT_07s0289g00060.t01	Wine grape	cytosol	36.48	43.26
CDX79437	Canola	plastid	42.06	43.08
AT1G05675.1	Thale cress	cytosol, golgi, plastid	41.85	43.05
KRH40228	Soybean	plastid	30.9	42.99
AT2G43840.2	Thale cress	cytosol, golgi, plastid	41.42	42.98
CDY17907	Canola	mitochondrion, plastid	41.42	42.98
VIT_07s0289g00050.t01	Wine grape	cytosol	42.06	42.98
KRH00991	Soybean	cytosol	41.85	42.95
VIT_05s0094g01040.t01	Wine grape	mitochondrion	39.48	42.89
KRH18457	Soybean	cytosol	42.27	42.83
KRH43018	Soybean	cytosol, nucleus, peroxisome, plastid	42.27	42.83
VIT_05s0094g01000.t01	Wine grape	plastid	41.63	42.83
KRG93568	Soybean	mitochondrion	41.2	42.76
Bra015448.1-P	Field mustard	golgi, plastid	41.42	42.6
CDY60796	Canola	plastid	42.49	42.49
Bra030620.1-P	Field mustard	cytosol, golgi, plastid	41.2	42.38
PGSC0003DMT400075461	Potato	cytosol, golgi, plastid	40.99	42.35
Bra021740.1-P	Field mustard	plastid	41.42	42.32
KRH69473	Soybean	cytosol, peroxisome, plastid	41.42	42.23
Bra024634.1-P	Field mustard	plastid	42.27	42.18
CDY16245	Canola	plastid	42.27	42.18
CDY10139	Canola	golgi, plastid	40.99	42.16
KRH40227	Soybean	cytosol, golgi, plastid	40.99	42.16
Solyc12g096830.1.1	Tomato	cytosol, golgi, nucleus	40.99	42.16
PGSC0003DMT400024619	Potato	plastid	31.12	42.15
AT1G05680.1	Thale cress	golgi, mitochondrion, plastid	40.77	41.94
KRH74679	Soybean	golgi, mitochondrion, plastid	41.85	41.94
CDY51326	Canola	golgi, plastid	40.99	41.89
KRH18456	Soybean	cytosol, golgi, plastid	40.34	41.87
PGSC0003DMT400055959	Potato	cytosol, golgi, plastid	41.42	41.87
KRG93567	Soybean	cytosol, golgi, mitochondrion, plastid	40.77	41.85
PGSC0003DMT400075463	Potato	cytosol, peroxisome, plastid	40.13	41.74
PGSC0003DMT400053175	Potato	cytosol, golgi, plastid	40.99	41.7
Solyc08g062220.2.1	Tomato	cytosol, golgi, plastid	40.99	41.52
Solyc06g007650.1.1	Tomato	cytosol, golgi, plastid	40.77	41.3
CDY64375	Canola	plastid	41.63	40.93
CDY65159	Canola	cytosol	25.97	40.88
AT1G24100.1	Thale cress	plastid	40.34	40.87
KRH08574	Soybean	cytosol	41.42	40.38
Bra021743.1-P	Field mustard	cytosol, golgi, plastid	39.06	39.91
CDY19104	Canola	cytosol, peroxisome, plastid	39.06	39.91
Solyc12g096820.1.1	Tomato	plastid	39.48	39.66
CDY42069	Canola	cytosol, golgi, plastid	38.63	39.47
VIT_05s0094g01050.t01	Wine grape	cytosol	38.84	39.43
AT2G31790.1	Thale cress	cytosol, golgi, plastid	38.63	39.39
CDY15370	Canola	cytosol, golgi, plastid	38.41	39.25
CDY34513	Canola	cytosol, golgi, plastid	38.41	39.25
AT2G31750.2	Thale cress	plastid	40.99	38.98
Bra005641.1-P	Field mustard	mitochondrion	36.27	38.85
EER93634	Sorghum	plastid	39.7	37.6
PGSC0003DMT400025914	Potato	cytosol	37.12	36.97
Solyc04g082860.1.1	Tomato	cytosol	36.27	36.34
OQU86341	Sorghum	cytosol, golgi	28.54	34.1
EES00187	Sorghum	cytosol	35.41	33.54
EER88587	Sorghum	plastid	34.76	33.4
EER89599	Sorghum	cytosol, golgi, plastid	33.48	33.05
EES19914	Sorghum	golgi, plastid	33.05	32.63
CDY67862	Canola	plastid	15.24	32.57
EER89995	Sorghum	mitochondrion	34.12	32.52
KXG31912	Sorghum	plastid	32.4	32.4
EES00287	Sorghum	plastid	33.05	31.95
KXG26366	Sorghum	cytosol, peroxisome, plastid	25.32	31.89
KXG20270	Sorghum	plastid	32.62	31.6
EES19138	Sorghum	plastid	34.55	30.67
EES16515	Sorghum	cytosol	33.05	29.96
OQU82861	Sorghum	cytosol	31.33	28.74
KXG27711	Sorghum	cytosol, extracellular, golgi	30.69	28.43
PGSC0003DMT400025913	Potato	cytosol	13.3	26.96
OQU84527	Sorghum	plastid	31.12	25.89
VIT_05s0094g01030.t01	Wine grape	cytosol	42.27	23.62
OQU76646	Sorghum	nucleus	33.91	18.85

Protein Annotations

Gene3D:3.40.50.2000	MapMan:50.2.4	EntrezGene:8064871	UniProt:C5X0I8	EnsemblPlants:EER94182	ProteinID:EER94182
ProteinID:EER94182.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758	GO:GO:0043231
GO:GO:0080043	GO:GO:0080044	PFAM:PF00201	ScanProsite:PS00375	PANTHER:PTHR11926	PANTHER:PTHR11926:SF264
EnsemblPlantsGene:SORBI_3001G238500	SUPFAM:SSF53756	unigene:Sbi.13851	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS	UniParc:UPI0001A831ED
RefSeq:XP_002467184.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:24521497..24523728

Molecular Weight (calculated)

51124.0 Da

IEP (calculated)

6.292

GRAVY (calculated)

-0.174

Length

466 amino acids

Sequence
(BLAST)

001: MAGSNNVSVR VLLVSYPAQG HINPLFQLGK RLAIHHGVRC TLAVARSALG SSVPPGPGAV PVVAISDGCD LGGYDEVGDV HEYLARLQSA GSRTLDELLG
101: SESSHGRPVR VVVYDAFLLW VPRVARQHGA SCAAFFTQAC SVNVVYDHAW RGDVKLPVDK VLAELPGLPK GLQLEPRDCS SFLTQQDDSS STSTYLDLLL
201: QQCQGLEVAD HVLINSFYEL QTEEAEYMAS RWAAKTIGPT LPSAYLDNRM PDDSSYSFSL HAPMATECKA WLAKRPARSV VYVSFGSIAA PGPDQLAEMA
301: QGLYNSGKAF LWVVRGPETS KLPKSFVSKV KENEERGLIV AWCPQLEVLA HPAVGCFVTH CGWNSTMEGL GIGVPMVAMP QWSDQPMNAK YIEDVWRVGV
401: RARPDMEGVI RKDEVERCVR QVMDGEKSKE YMENAMNWRE KAKRAMSEGG SSDRNIIEFL GKFGWN

Best Arabidopsis Sequence Match ( AT2G43820.1 )
(BLAST)

001: MEHKRGHVLA VPYPTQGHIT PFRQFCKRLH FKGLKTTLAL TTFVFNSINP DLSGPISIAT ISDGYDHGGF ETADSIDDYL KDFKTSGSKT IADIIQKHQT
101: SDNPITCIVY DAFLPWALDV AREFGLVATP FFTQPCAVNY VYYLSYINNG SLQLPIEELP FLELQDLPSF FSVSGSYPAY FEMVLQQFIN FEKADFVLVN
201: SFQELELHEN ELWSKACPVL TIGPTIPSIY LDQRIKSDTG YDLNLFESKD DSFCINWLDT RPQGSVVYVA FGSMAQLTNV QMEELASAVS NFSFLWVVRS
301: SEEEKLPSGF LETVNKEKSL VLKWSPQLQV LSNKAIGCFL THCGWNSTME ALTFGVPMVA MPQWTDQPMN AKYIQDVWKA GVRVKTEKES GIAKREEIEF
401: SIKEVMEGER SKEMKKNVKK WRDLAVKSLN EGGSTDTNID TFVSRVQSK

Arabidopsis Description

UGT74F2Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VQS4]
SUBAcon: [golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.