CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015623_P001	Maize	cytosol	76.96	87.78
Zm00001d053715_P001	Maize	extracellular	77.5	86.8
Os02t0188000-01	Rice	plasma membrane	58.75	76.87
EES00287	Sorghum	plastid	65.18	75.73
HORVU6Hr1G035370.1	Barley	cytosol, plastid	66.25	75.41
TraesCS6D01G162700.1	Wheat	cytosol	65.18	74.19
TraesCS6B01G201500.1	Wheat	cytosol, plastid	65.18	74.04
TraesCS6A01G173600.1	Wheat	cytosol	64.64	73.43
EER89599	Sorghum	cytosol, golgi, plastid	61.43	72.88
HORVU3Hr1G096330.1	Barley	plastid	59.82	70.68
GSMUA_AchrUn_...	Banana	cytosol, golgi, mitochondrion, plastid	23.39	57.46
GSMUA_Achr2P05270_001	Banana	mitochondrion	30.89	56.91
GSMUA_Achr1P09740_001	Banana	plastid	36.79	55.53
EES19914	Sorghum	golgi, plastid	40.18	47.67
VIT_03s0091g00040.t01	Wine grape	plastid	38.93	45.61
OQU86341	Sorghum	cytosol, golgi	31.61	45.38
KXG31912	Sorghum	plastid	37.68	45.28
VIT_03s0180g00320.t01	Wine grape	plastid	38.57	45.09
VIT_03s0180g00200.t01	Wine grape	plastid	38.39	44.89
KRG91016	Soybean	cytosol	35.54	41.46
AT4G15490.1	Thale cress	cytosol, golgi, plastid	35.36	41.34
AT4G15480.1	Thale cress	cytosol, golgi, nucleus	36.07	41.22
CDY09758	Canola	cytosol	36.07	41.22
Solyc08g014050.1.1	Tomato	cytosol, golgi	35.71	40.98
CDX90587	Canola	cytosol	35.71	40.82
Bra012784.1-P	Field mustard	plastid	35.54	40.61
CDY22916	Canola	cytosol, plastid	34.46	40.55
CDY22915	Canola	cytosol	34.82	40.46
CDY49300	Canola	cytosol	34.82	40.46
Bra039545.1-P	Field mustard	cytosol	34.82	40.37
Solyc12g096870.1.1	Tomato	plastid	35.0	40.33
PGSC0003DMT400066544	Potato	plastid	35.0	40.25
PGSC0003DMT400037886	Potato	golgi	35.0	40.16
PGSC0003DMT400075456	Potato	golgi	35.36	40.16
Bra039547.1-P	Field mustard	cytosol, plastid	34.11	40.13
PGSC0003DMT400075458	Potato	golgi, plastid	34.82	40.12
Solyc01g107560.2.1	Tomato	plastid	34.82	40.04
CDY54974	Canola	cytosol, golgi, plastid	30.0	39.91
CDY49298	Canola	plastid	26.61	39.31
CDY54975	Canola	mitochondrion, plastid	33.21	38.51
AT4G15500.1	Thale cress	cytosol	32.32	38.11
Bra023872.1-P	Field mustard	cytosol	33.39	37.63
CDY37279	Canola	cytosol	33.21	37.42
CDY19291	Canola	cytosol	33.04	37.22
Bra031290.1-P	Field mustard	plastid	32.86	37.02
CDY38624	Canola	plastid	32.68	36.82
CDY44326	Canola	plastid	32.5	36.62
AT3G21560.1	Thale cress	cytosol, golgi	32.14	36.29
EER99195	Sorghum	plastid	29.29	35.12
EER99196	Sorghum	plastid	29.64	34.51
EER89995	Sorghum	mitochondrion	29.82	34.15
EER97051	Sorghum	cytosol	29.82	33.81
EER97052	Sorghum	cytosol, peroxisome, plastid	28.04	33.48
EER88587	Sorghum	plastid	27.68	31.96
EER92066	Sorghum	cytosol	27.32	31.94
KXG26366	Sorghum	cytosol, peroxisome, plastid	21.07	31.89
EER93634	Sorghum	plastid	27.5	31.3
EES11834	Sorghum	plastid	26.25	31.21
KXG36016	Sorghum	cytosol	20.89	31.12
EER94182	Sorghum	mitochondrion	25.89	31.12
EES00187	Sorghum	cytosol	27.32	31.1
OQU92304	Sorghum	plastid	25.54	30.89
KXG20270	Sorghum	plastid	26.07	30.35
OQU82861	Sorghum	cytosol	26.96	29.72
EES19138	Sorghum	plastid	27.5	29.33
KXG38625	Sorghum	plastid	20.89	29.18
EES16515	Sorghum	cytosol	26.43	28.79
KXG27711	Sorghum	cytosol, extracellular, golgi	23.93	26.64
OQU76646	Sorghum	nucleus	27.86	18.62

Protein Annotations

EnsemblPlants:OQU84527	EnsemblPlantsGene:SORBI_3004G071200	Gene3D:3.40.50.2000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758	InterPro:UDP_glucos_trans	InterPro:UDP_glycos_trans_CS
PANTHER:PTHR11926	PANTHER:PTHR11926:SF705	PFAM:PF00201	ProteinID:OQU84527	ProteinID:OQU84527.1	ScanProsite:PS00375
SEG:seg	SUPFAM:SSF53756	UniParc:UPI000B8BA73A	UniProt:A0A1Z5RLH0	MapMan:50.2.4	:

Description

hypothetical protein

Coordinates

chr4:-:5748572..5750859

Molecular Weight (calculated)

59194.5 Da

IEP (calculated)

5.487

GRAVY (calculated)

0.012

Length

560 amino acids

Sequence
(BLAST)

001: MRVTWSRPTS SLPEPNFLSP SHIDRSSSSR PEGDSRVHRC TLPASSIRGR PDEDVAAEVR VRSMGEEAAA APTVAAAAAT GTGGAPPHLL LICFPGQGHV
101: NPMLRLAKRI AAKGLLVTFS SVSTVGAKLA ASAGVSAGGD GVAVGRGRVR FEFLDDEDPG PDLDDLMRHL AREGPPAFAK LLARQAAERR PVACVVVNPF
201: MPWAADVAAD AGIPSAVLWV QSCAVFSLYY HHVHGLVEFP REDDPDARFT LPGLPEMSVA DVPSFLLPSN PYKLLVDAII AQFRAIGRAS WVLVNSFTEL
301: ERDVAAALPG VTPRPPELIP VGPLIELAGD GDGAVRGDLI KAADDCVEWL DAQPPRSVVY ASVGSVVLLN AEEVGEMAHG LAATGRPFLW VVRPDTREHL
401: PEGFLDAVAG RGTVVPWSPQ DRVLAHPSTA CFLTHCGWNS TLETIAAGVP VVAFPQWGDQ CTDAKFLVEE LRMGVRLRGS PLRRDAVREA VEAAVAGAEA
501: DAMLASARRW SAAAREAVAP GGSSDKHVQA FVDEVARRAC GVQAAKVVPP PPPSSETPDS

Best Arabidopsis Sequence Match ( AT4G15480.1 )
(BLAST)

001: MGSISEMVFE TCPSPNPIHV MLVSFQGQGH VNPLLRLGKL IASKGLLVTF VTTELWGKKM RQANKIVDGE LKPVGSGSIR FEFFDEEWAE DDDRRADFSL
101: YIAHLESVGI REVSKLVRRY EEANEPVSCL INNPFIPWVC HVAEEFNIPC AVLWVQSCAC FSAYYHYQDG SVSFPTETEP ELDVKLPCVP VLKNDEIPSF
201: LHPSSRFTGF RQAILGQFKN LSKSFCVLID SFDSLEQEVI DYMSSLCPVK TVGPLFKVAR TVTSDVSGDI CKSTDKCLEW LDSRPKSSVV YISFGTVAYL
301: KQEQIEEIAH GVLKSGLSFL WVIRPPPHDL KVETHVLPQE LKESSAKGKG MIVDWCPQEQ VLSHPSVACF VTHCGWNSTM ESLSSGVPVV CCPQWGDQVT
401: DAVYLIDVFK TGVRLGRGAT EERVVPREEV AEKLLEATVG EKAEELRKNA LKWKAEAEAA VAPGGSSDKN FREFVEKLGA GVTKTKDNGY

Arabidopsis Description

UGT84A1UDP-glycosyltransferase 84A1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF20]
SUBAcon: [golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.