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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • peroxisome 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:endoplasmic reticulum
YLoc:golgi
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G035370.1 Barley cytosol, plastid 79.67 69.31
TraesCS6D01G162700.1 Wheat cytosol 78.04 67.89
TraesCS6B01G201500.1 Wheat cytosol, plastid 77.8 67.55
TraesCS6A01G173600.1 Wheat cytosol 76.87 66.73
Zm00001d015623_P001 Maize cytosol 75.0 65.38
HORVU3Hr1G096330.1 Barley plastid 72.2 65.19
Zm00001d053715_P001 Maize extracellular 75.47 64.6
EES00287 Sorghum plastid 72.66 64.52
EER89599 Sorghum cytosol, golgi, plastid 68.93 62.5
Zm00001d037298_P001 Maize cytosol, peroxisome, plastid 68.22 62.26
OQU84527 Sorghum plastid 76.87 58.75
GSMUA_Achr2P05270_001 Banana mitochondrion 37.15 52.3
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plastid 27.57 51.75
GSMUA_Achr1P09740_001 Banana plastid 42.52 49.06
Os01t0686200-01 Rice golgi 43.22 43.43
VIT_03s0091g00040.t01 Wine grape plastid 46.26 41.42
VIT_03s0180g00320.t01 Wine grape plastid 45.56 40.71
VIT_03s0180g00200.t01 Wine grape plastid 45.33 40.5
Os01t0686300-01 Rice cytosol 44.16 39.54
CDY09758 Canola cytosol 42.06 36.73
Solyc01g107560.2.1 Tomato plastid 41.59 36.55
AT4G15490.1 Thale cress cytosol, golgi, plastid 40.89 36.53
AT4G15480.1 Thale cress cytosol, golgi, nucleus 41.82 36.53
CDX90587 Canola cytosol 41.59 36.33
CDY22915 Canola cytosol 40.89 36.31
Solyc08g014050.1.1 Tomato cytosol, golgi 41.36 36.27
KRG91016 Soybean cytosol 40.65 36.25
Bra039545.1-P Field mustard cytosol 40.89 36.23
PGSC0003DMT400066544 Potato plastid 41.12 36.14
Bra012784.1-P Field mustard plastid 41.36 36.12
CDY49300 Canola cytosol 40.65 36.1
PGSC0003DMT400037886 Potato golgi 41.12 36.07
PGSC0003DMT400075458 Potato golgi, plastid 40.65 35.8
CDY22916 Canola cytosol, plastid 39.72 35.71
Bra039547.1-P Field mustard cytosol, plastid 39.72 35.71
PGSC0003DMT400075456 Potato golgi 41.12 35.7
Os05t0552700-01 Rice golgi, mitochondrion, plastid 43.46 35.63
Solyc12g096870.1.1 Tomato plastid 40.42 35.6
CDY54974 Canola cytosol, golgi, plastid 34.35 34.92
AT4G15500.1 Thale cress cytosol 38.32 34.53
CDY54975 Canola mitochondrion, plastid 38.32 33.95
CDY37279 Canola cytosol 39.25 33.8
Bra023872.1-P Field mustard cytosol 39.25 33.8
CDY49298 Canola plastid 29.91 33.77
CDY19291 Canola cytosol 39.02 33.6
CDY38624 Canola plastid 38.32 33.0
AT3G21560.1 Thale cress cytosol, golgi 38.08 32.86
CDY44326 Canola plastid 38.08 32.8
Bra031290.1-P Field mustard plastid 38.08 32.8
Os09t0517900-01 Rice cytosol 35.75 31.74
Os04t0204100-00 Rice plastid 26.64 31.41
Os06t0593800-01 Rice golgi 34.11 31.13
Os04t0204000-00 Rice plastid 25.7 30.73
Os09t0518200-01 Rice cytosol, peroxisome, plastid 32.24 29.42
Os04t0206600-01 Rice plastid 31.54 28.97
Os04t0206450-01 Rice mitochondrion 22.66 28.96
Os03t0693600-00 Rice plastid 34.81 28.93
Os04t0203600-00 Rice cytosol 25.23 28.57
Os04t0206500-01 Rice cytosol, peroxisome, plastid 30.61 28.36
Os04t0206700-01 Rice plasma membrane 32.24 28.16
Os09t0518000-00 Rice cytosol 32.71 28.0
Os01t0179600-01 Rice cytosol 31.78 27.93
Os04t0206000-00 Rice mitochondrion 23.13 27.81
Os06t0593200-01 Rice plastid 32.01 27.79
Os05t0179950-00 Rice plastid 32.24 26.19
Os11t0145200-01 Rice plasma membrane 27.8 24.69
Os02t0203300-00 Rice mitochondrion, nucleus, peroxisome, plastid 22.66 19.21
Os11t0145100-00 Rice cytosol 0.7 1.17
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4ProteinID:BAD15522.1ProteinID:BAF08047.1ProteinID:BAS77372.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0008150GO:GO:0008152
GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231GO:GO:0080043GO:GO:0080044
EnsemblPlantsGene:Os02g0188000EnsemblPlants:Os02t0188000-01PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF705
UniProt:Q6ZHS1SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0000358A94SEG:seg
Description
UDP-glucuronosyl/UDP-glucosyltransferase family protein. (Os02t0188000-01)
Coordinates
chr2:-:4888511..4890272
Molecular Weight (calculated)
44864.0 Da
IEP (calculated)
4.537
GRAVY (calculated)
0.348
Length
428 amino acids
Sequence
(BLAST)
001: MGEEAAAATV TAAAAAAASG GAPHLLLICF PGQGHVNPML RLAKRIAAKG LVVTFSSTSA IGAKLVESSG VSVGGDGVPL GGGRIRFEFL EDGFDGSDLD
101: ELMRHLGTAG PAAFAELLAR QEAAGRPVAC VVGNPFIPWA VDVAAAAGIL SAVLWVQSCA VFSLYYHRVH GLVEFPPEDD LDARLTLPGL PAMSVADVPS
201: FLLPSNPYMS LTEAIQQQIR TIDKATWVFV NSFTELERDV VDALRGVATS PPPPPLIPVG PLIELEGDAA VRGDMIRAAD DCVGWLDEHP PRSVVYASLG
301: SVVVLSAGEV AEMAHGLAST GRPFLWVVRP DSRALLPEGF LDAVAGRGMV VPWSPQEQVL VHPAVACFLT HCGWNSTLET VAAGVPVVAF PQWGDQCTDA
401: MFLVDELGMG VRHVEAFVEE VKARAAKA
Best Arabidopsis Sequence Match ( AT4G15480.1 )
(BLAST)
001: MGSISEMVFE TCPSPNPIHV MLVSFQGQGH VNPLLRLGKL IASKGLLVTF VTTELWGKKM RQANKIVDGE LKPVGSGSIR FEFFDEEWAE DDDRRADFSL
101: YIAHLESVGI REVSKLVRRY EEANEPVSCL INNPFIPWVC HVAEEFNIPC AVLWVQSCAC FSAYYHYQDG SVSFPTETEP ELDVKLPCVP VLKNDEIPSF
201: LHPSSRFTGF RQAILGQFKN LSKSFCVLID SFDSLEQEVI DYMSSLCPVK TVGPLFKVAR TVTSDVSGDI CKSTDKCLEW LDSRPKSSVV YISFGTVAYL
301: KQEQIEEIAH GVLKSGLSFL WVIRPPPHDL KVETHVLPQE LKESSAKGKG MIVDWCPQEQ VLSHPSVACF VTHCGWNSTM ESLSSGVPVV CCPQWGDQVT
401: DAVYLIDVFK TGVRLGRGAT EERVVPREEV AEKLLEATVG EKAEELRKNA LKWKAEAEAA VAPGGSSDKN FREFVEKLGA GVTKTKDNGY
Arabidopsis Description
UGT84A1UDP-glycosyltransferase 84A1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF20]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.