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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90587 Canola cytosol 89.18 89.18
Bra012784.1-P Field mustard plastid 88.98 88.98
CDY09758 Canola cytosol 87.76 87.76
Bra039547.1-P Field mustard cytosol, plastid 77.76 80.04
CDY22916 Canola cytosol, plastid 77.14 79.41
CDY49298 Canola plastid 60.82 78.63
AT4G15490.1 Thale cress cytosol, golgi, plastid 66.33 67.85
AT4G15500.1 Thale cress cytosol 61.22 63.16
AT3G21560.1 Thale cress cytosol, golgi 63.06 62.3
VIT_03s0180g00320.t01 Wine grape plastid 56.12 57.41
VIT_03s0180g00200.t01 Wine grape plastid 56.12 57.41
VIT_03s0091g00040.t01 Wine grape plastid 55.1 56.49
PGSC0003DMT400066544 Potato plastid 52.04 52.36
KRG91016 Soybean cytosol 50.61 51.67
Solyc01g107560.2.1 Tomato plastid 50.41 50.72
Solyc12g096870.1.1 Tomato plastid 49.8 50.21
PGSC0003DMT400075458 Potato golgi, plastid 49.8 50.21
PGSC0003DMT400075456 Potato golgi 50.41 50.1
PGSC0003DMT400037886 Potato golgi 49.59 49.8
Solyc08g014050.1.1 Tomato cytosol, golgi 48.98 49.18
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plastid 21.43 46.05
GSMUA_Achr1P09740_001 Banana plastid 33.47 44.2
HORVU3Hr1G096330.1 Barley plastid 42.24 43.67
GSMUA_Achr2P05270_001 Banana mitochondrion 26.94 43.42
EES00287 Sorghum plastid 42.04 42.74
HORVU6Hr1G035370.1 Barley cytosol, plastid 42.65 42.48
TraesCS6A01G173600.1 Wheat cytosol 42.65 42.39
TraesCS6D01G162700.1 Wheat cytosol 42.24 42.07
Zm00001d037298_P001 Maize cytosol, peroxisome, plastid 40.2 42.0
Os02t0188000-01 Rice plasma membrane 36.53 41.82
TraesCS6B01G201500.1 Wheat cytosol, plastid 42.04 41.78
EER89599 Sorghum cytosol, golgi, plastid 40.0 41.53
Zm00001d015623_P001 Maize cytosol 40.82 40.73
Zm00001d053715_P001 Maize extracellular 41.22 40.4
Os01t0686200-01 Rice golgi 33.88 38.97
Zm00001d009484_P001 Maize golgi, mitochondrion, plastid 36.73 38.71
EES19914 Sorghum golgi, plastid 37.14 38.56
Zm00001d039891_P001 Maize golgi, mitochondrion 35.1 38.22
KXG31912 Sorghum plastid 35.92 37.77
TraesCS1B01G399100.1 Wheat golgi, plastid 35.1 37.07
HORVU3Hr1G063660.1 Barley plastid 34.29 36.92
AT2G23260.1 Thale cress cytosol 33.88 36.4
TraesCS1A01G378300.1 Wheat golgi, plastid 34.69 36.25
TraesCS3A01G264200.1 Wheat plastid 34.08 36.23
OQU84527 Sorghum plastid 41.22 36.07
TraesCS3B01G297600.1 Wheat plastid 33.88 36.01
AT1G05680.1 Thale cress golgi, mitochondrion, plastid 33.06 35.76
Os01t0686300-01 Rice cytosol 34.69 35.56
TraesCS1D01G385300.1 Wheat plastid 34.29 35.44
AT2G23250.1 Thale cress mitochondrion 31.63 35.39
AT1G05530.1 Thale cress plastid 32.86 35.38
Zm00001d043829_P001 Maize plastid 34.69 35.34
AT1G05675.1 Thale cress cytosol, golgi, plastid 32.45 35.1
OQU86341 Sorghum cytosol, golgi 27.76 34.87
TraesCS3D01G264300.1 Wheat cytosol 34.69 34.69
AT2G43840.2 Thale cress cytosol, golgi, plastid 31.43 34.3
TraesCS1B01G399200.1 Wheat cytosol 35.31 33.99
AT4G14090.1 Thale cress plastid 31.43 33.77
AT4G15550.1 Thale cress plastid 32.45 33.54
AT2G43820.1 Thale cress cytosol, golgi, plastid 30.61 33.41
Os05t0552700-01 Rice golgi, mitochondrion, plastid 34.9 32.76
AT2G31750.2 Thale cress plastid 32.45 32.45
AT1G05560.2 Thale cress plastid 33.88 31.98
AT2G31790.1 Thale cress cytosol, golgi, plastid 29.59 31.73
AT2G23210.1 Thale cress cytosol 18.57 31.71
AT1G24100.1 Thale cress plastid 27.76 29.57
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:827220UniProt:A0A178UZA1ProteinID:AEE83609.1ArrayExpress:AT4G15480
EnsemblPlantsGene:AT4G15480RefSeq:AT4G15480TAIR:AT4G15480RefSeq:AT4G15480-TAIR-GEnsemblPlants:AT4G15480.1TAIR:AT4G15480.1
Unigene:At.66613EMBL:BT002014EMBL:BT015796ProteinID:CAB10326.1ProteinID:CAB78590.1GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0008150GO:GO:0008152
GO:GO:0009628GO:GO:0009636GO:GO:0010224GO:GO:0016740GO:GO:0016757GO:GO:0016758
GO:GO:0035251GO:GO:0043231GO:GO:0047218GO:GO:0050284GO:GO:0080043GO:GO:0080044
GO:GO:0102359GO:GO:0102361EMBL:KJ138754RefSeq:NP_193283.2ProteinID:OAO99238.1PFAM:PF00201
PO:PO:0000037PO:PO:0000293PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007611PO:PO:0007616PO:PO:0009009PO:PO:0009010PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0025022ScanProsite:PS00375PANTHER:PTHR11926
PANTHER:PTHR11926:SF515UniProt:Q5XF20SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSSymbol:UGT84A1
UniParc:UPI0000196CA2UniProt:W8Q6K4SEG:seg:::
Description
UGT84A1UDP-glycosyltransferase 84A1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF20]
Coordinates
chr4:-:8848801..8850516
Molecular Weight (calculated)
54484.2 Da
IEP (calculated)
5.177
GRAVY (calculated)
-0.122
Length
490 amino acids
Sequence
(BLAST)
001: MGSISEMVFE TCPSPNPIHV MLVSFQGQGH VNPLLRLGKL IASKGLLVTF VTTELWGKKM RQANKIVDGE LKPVGSGSIR FEFFDEEWAE DDDRRADFSL
101: YIAHLESVGI REVSKLVRRY EEANEPVSCL INNPFIPWVC HVAEEFNIPC AVLWVQSCAC FSAYYHYQDG SVSFPTETEP ELDVKLPCVP VLKNDEIPSF
201: LHPSSRFTGF RQAILGQFKN LSKSFCVLID SFDSLEQEVI DYMSSLCPVK TVGPLFKVAR TVTSDVSGDI CKSTDKCLEW LDSRPKSSVV YISFGTVAYL
301: KQEQIEEIAH GVLKSGLSFL WVIRPPPHDL KVETHVLPQE LKESSAKGKG MIVDWCPQEQ VLSHPSVACF VTHCGWNSTM ESLSSGVPVV CCPQWGDQVT
401: DAVYLIDVFK TGVRLGRGAT EERVVPREEV AEKLLEATVG EKAEELRKNA LKWKAEAEAA VAPGGSSDKN FREFVEKLGA GVTKTKDNGY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.