Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G23250.1 | Thale cress | mitochondrion | 76.66 | 50.23 |
| AT2G23260.1 | Thale cress | cytosol | 73.52 | 46.27 |
| CDX76864 | Canola | cytosol | 69.69 | 44.35 |
| CDY46083 | Canola | cytosol | 68.99 | 43.9 |
| Bra039191.1-P | Field mustard | cytosol | 68.29 | 43.46 |
| Bra032179.1-P | Field mustard | extracellular, golgi | 62.37 | 41.92 |
| CDY67489 | Canola | plastid | 50.52 | 36.8 |
| KRH04513 | Soybean | cytosol, golgi, peroxisome | 47.74 | 28.31 |
| AT4G15480.1 | Thale cress | cytosol, golgi, nucleus | 31.71 | 18.57 |
| AT4G15490.1 | Thale cress | cytosol, golgi, plastid | 29.62 | 17.75 |
| AT4G15500.1 | Thale cress | cytosol | 29.27 | 17.68 |
| AT3G21560.1 | Thale cress | cytosol, golgi | 29.97 | 17.34 |
| AT4G15550.1 | Thale cress | plastid | 27.53 | 16.67 |
| AT1G05530.1 | Thale cress | plastid | 26.13 | 16.48 |
| AT2G43820.1 | Thale cress | cytosol, golgi, plastid | 24.74 | 15.81 |
| AT4G14090.1 | Thale cress | plastid | 25.09 | 15.79 |
| AT1G05675.1 | Thale cress | cytosol, golgi, plastid | 24.39 | 15.45 |
| AT1G24100.1 | Thale cress | plastid | 24.39 | 15.22 |
| AT1G05680.1 | Thale cress | golgi, mitochondrion, plastid | 23.69 | 15.01 |
| AT2G43840.2 | Thale cress | cytosol, golgi, plastid | 23.34 | 14.92 |
| AT1G05560.2 | Thale cress | plastid | 26.13 | 14.45 |
| AT2G31790.1 | Thale cress | cytosol, golgi, plastid | 21.95 | 13.79 |
| AT2G31750.2 | Thale cress | plastid | 22.65 | 13.27 |
Protein Annotations
| ArrayExpress:AT2G23210 | EMBL:DQ446552 | EMBL:KJ138903 | EnsemblPlants:AT2G23210.1 | EnsemblPlantsGene:AT2G23210 | EntrezGene:816853 |
| Gene3D:3.40.50.2000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | PANTHER:PTHR11926 | PANTHER:PTHR11926:SF697 |
| ProteinID:AEC07429.1 | RefSeq:AT2G23210 | RefSeq:AT2G23210-TAIR-G | RefSeq:NP_001318272.1 | SUPFAM:SSF53756 | TAIR:AT2G23210 |
| TAIR:AT2G23210.1 | UniParc:UPI0000D5BC7A | UniProt:Q1PF14 | MapMan:50.2.4 | : | : |
Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q1PF14]
Coordinates
chr2:-:9881260..9883397
Molecular Weight (calculated)
32496.2 Da
IEP (calculated)
4.926
GRAVY (calculated)
-0.039
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSIEGQETH VLMVALPFQG HLNPMLKFAK HLARTNLHFT LATIESARDL LSSTDEPHSL VDLVFFSDGL PKDDPRDHEP LTESLRKVGA NNFSKIIEGK
101: RFDCIISVPF TPWVPAVAAA HNIPCAILWI EACAGFSVYY RYYMKTNSFP DLEDPNQKVE LPGLPFLEVR DLPTLMLPSH GAIFNTLMAE FVECLKDVKW
201: VLANSFYELE SVIIESMFDL KPIIPIGPLV SPFLLGADED KILDGKSLDM WKADDYCMEW LDKQVRSSVF TYLSEAYSNH QRIKSRP
101: RFDCIISVPF TPWVPAVAAA HNIPCAILWI EACAGFSVYY RYYMKTNSFP DLEDPNQKVE LPGLPFLEVR DLPTLMLPSH GAIFNTLMAE FVECLKDVKW
201: VLANSFYELE SVIIESMFDL KPIIPIGPLV SPFLLGADED KILDGKSLDM WKADDYCMEW LDKQVRSSVF TYLSEAYSNH QRIKSRP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.