CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032179.1-P	Field mustard	extracellular, golgi	94.42	87.12
CDX76864	Canola	cytosol	76.4	66.74
CDY46083	Canola	cytosol	75.63	66.08
CDX76863	Canola	plastid	75.38	64.43
AT2G23250.1	Thale cress	mitochondrion	71.07	63.93
CDY46082	Canola	plastid	74.62	63.77
AT2G23210.1	Thale cress	cytosol	36.8	50.52
KRH04513	Soybean	cytosol, golgi, peroxisome	44.42	36.16
CDY69281	Canola	cytosol	20.56	34.18
CDY67861	Canola	extracellular, golgi	21.57	32.95
CDX79438	Canola	cytosol, golgi, nucleus	20.05	32.51
CDY27124	Canola	cytosol, mitochondrion, peroxisome, plastid	34.52	29.96
CDX95572	Canola	cytosol, nucleus, peroxisome	29.7	29.92
CDY12370	Canola	cytosol, mitochondrion, peroxisome, plastid	34.26	29.54
CDY65144	Canola	cytosol	33.76	28.79
CDY22902	Canola	cytosol	33.76	28.79
CDX90587	Canola	cytosol	35.79	28.78
CDY17908	Canola	cytosol	32.74	28.6
CDY09758	Canola	cytosol	35.53	28.57
CDY15551	Canola	cytosol	27.16	28.46
CDX83456	Canola	cytosol, golgi, plastid	32.23	28.41
CDY22916	Canola	cytosol, plastid	34.26	28.36
CDY44260	Canola	cytosol, mitochondrion, peroxisome, plastid	31.73	28.22
CDY49300	Canola	cytosol	34.52	28.22
CDX79798	Canola	cytosol, nucleus, peroxisome	32.23	28.16
CDY46180	Canola	mitochondrion, plastid	32.49	28.07
CDY17907	Canola	mitochondrion, plastid	31.98	28.06
CDY64613	Canola	mitochondrion	31.47	27.68
CDY15370	Canola	cytosol, golgi, plastid	31.98	27.63
CDY19104	Canola	cytosol, peroxisome, plastid	31.98	27.63
CDX79797	Canola	mitochondrion, plastid	31.47	27.62
CDY22915	Canola	cytosol	33.76	27.59
CDY54974	Canola	cytosol, golgi, plastid	29.44	27.55
CDY31602	Canola	plastid	30.96	27.48
CDY09070	Canola	cytosol, peroxisome, plastid	30.46	27.46
CDY71964	Canola	mitochondrion, plastid	32.74	27.45
CDY64614	Canola	mitochondrion	31.22	27.39
CDX83455	Canola	mitochondrion	31.22	27.39
CDY44326	Canola	plastid	34.52	27.36
CDY22741	Canola	plastid	30.71	27.25
CDY70064	Canola	cytosol	28.68	27.16
CDY37279	Canola	cytosol	34.26	27.16
CDY38624	Canola	plastid	34.26	27.16
CDY19291	Canola	cytosol	34.26	27.16
CDY65158	Canola	mitochondrion	30.71	26.95
CDY54975	Canola	mitochondrion, plastid	32.99	26.92
CDY22742	Canola	cytosol	31.22	26.57
CDY42069	Canola	cytosol, golgi, plastid	30.71	26.54
CDY34513	Canola	cytosol, golgi, plastid	30.71	26.54
CDY09069	Canola	plastid	31.73	26.48
CDY09068	Canola	cytosol, peroxisome, plastid	30.96	26.41
CDY51326	Canola	golgi, plastid	29.95	25.88
CDX92022	Canola	plastid	30.96	25.85
CDY21979	Canola	plastid	30.96	25.85
CDY47274	Canola	plastid	30.71	25.64
CDY10124	Canola	plastid	30.2	25.54
CDX68805	Canola	plastid	27.92	25.4
CDY49298	Canola	plastid	24.37	25.33
CDY10139	Canola	golgi, plastid	28.68	24.94
CDY16245	Canola	plastid	29.44	24.84
CDY60796	Canola	plastid	29.19	24.68
CDX79437	Canola	plastid	28.17	24.4
CDX84760	Canola	cytosol	27.92	24.18
CDY64375	Canola	plastid	27.66	23.0
CDY65159	Canola	cytosol	17.26	22.97
CDY09754	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	27.66	19.6
CDX90584	Canola	golgi	25.63	17.57
CDY67862	Canola	plastid	8.12	14.68

Protein Annotations

EnsemblPlants:CDY67489	EnsemblPlantsGene:GSBRNA2T00063667001	Gene3D:3.40.50.2000	GO:A0A078JL27	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016757	GO:GO:0016758	InterPro:UDP_glucos_trans
InterPro:UDP_glycos_trans_CS	PANTHER:PTHR11926	PANTHER:PTHR11926:SF697	PFAM:PF00201	ProteinID:CDY67489	ProteinID:CDY67489.1
ScanProsite:PS00375	SUPFAM:SSF53756	UniParc:UPI0004EF0DED	UniProt:A0A078JL27	MapMan:50.2.4	:

Description

BnaCnng55250DBnaCnng55250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JL27]

Coordinates

chrLK036167:-:278..1660

Molecular Weight (calculated)

43824.5 Da

IEP (calculated)

4.487

GRAVY (calculated)

-0.022

Length

394 amino acids

Sequence
(BLAST)

001: MATSVGQETH VLLPVTSSQP PTRPTKNTLA QWTSLSSLMG YQKTTQEPMI LSSCVAAAYN IPCALLWIQA CGAYSVYYRY YMKTNTFPED LEDLNQTVDL
101: PALPLLEVRD LPSFMLPSSG SNFNNLMLDF VDCLKNVKWV LVNSFYELES EIIDSMSDLK PIIPIGSLVS PFLLGADEDK TLDEKNLDLW RSDGDCMKWL
201: DTQARSSVVY ISFGSLLKWS ENQVKSIATA MRNRGDSFLW VIRPKEIAQN VDILHEMVQE GQGVVIEWGP QERILSHVAI SCFVTHCGWN STMETVVTGV
301: PVVAYPSWID QPLDARLLVD VFGIGVRMRN DAVDGELKVA EVERCIEAVT EGLSAEDMRR RARELKQAAR SALAPGGSSA QNLDSFIGYI TSCV

Best Arabidopsis Sequence Match ( AT2G23250.1 )
(BLAST)

001: MVALAFQGHL NPMLKFAKHL ARTNLHFTLA TTEQARDLLS STADEPHRPV DLAFFSDGLP KDDPRDPDTL AKSLKKDGAK NLSKIIEEKR FDCIISVPFT
101: PWVPAVAAAH NIPCAILWIQ ACGAFSVYYR YYMKTNPFPD LEDLNQTVEL PALPLLEVRD LPSLMLPSQG ANVNTLMAEF ADCLKDVKWV LVNSFYELES
201: EIIESMSDLK PIIPIGPLVS PFLLGNDEEK TLDMWKVDDY CMEWLDKQAR SSVVYISFGS ILKSLENQVE TIATALKNRG VPFLWVIRPK EKGENVQVLQ
301: EMVKEGKGVV TEWGQQEKIL SHMAISCFIT HCGWNSTIET VVTGVPVVAY PTWIDQPLDA RLLVDVFGIG VRMKNDAIDG ELKVAEVERC IEAVTEGPAA
401: ADMRRRATEL KHAARSAMSP GGSSAQNLDS FISDIPIT

Arabidopsis Description

UGT84B2UDP-glycosyltransferase 84B2 [Source:UniProtKB/Swiss-Prot;Acc:O22183]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.