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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012784.1-P Field mustard plastid 99.39 99.39
CDY09758 Canola cytosol 97.55 97.55
AT4G15480.1 Thale cress cytosol, golgi, nucleus 89.18 89.18
CDY22916 Canola cytosol, plastid 77.96 80.25
CDY49298 Canola plastid 61.22 79.16
CDY22915 Canola cytosol 64.29 65.35
CDY49300 Canola cytosol 64.29 65.35
CDY19291 Canola cytosol 64.69 63.78
CDY54974 Canola cytosol, golgi, plastid 54.69 63.66
CDY37279 Canola cytosol 64.29 63.38
CDY44326 Canola plastid 62.65 61.77
CDY38624 Canola plastid 62.45 61.57
CDY54975 Canola mitochondrion, plastid 60.2 61.08
VIT_03s0180g00200.t01 Wine grape plastid 57.35 58.66
VIT_03s0180g00320.t01 Wine grape plastid 56.94 58.25
VIT_03s0091g00040.t01 Wine grape plastid 56.12 57.53
PGSC0003DMT400066544 Potato plastid 53.47 53.8
KRG91016 Soybean cytosol 51.02 52.08
Solyc01g107560.2.1 Tomato plastid 51.63 51.95
PGSC0003DMT400075458 Potato golgi, plastid 50.2 50.62
Solyc12g096870.1.1 Tomato plastid 50.0 50.41
PGSC0003DMT400075456 Potato golgi 50.41 50.1
PGSC0003DMT400037886 Potato golgi 49.8 50.0
Solyc08g014050.1.1 Tomato cytosol, golgi 49.39 49.59
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plastid 21.43 46.05
HORVU3Hr1G096330.1 Barley plastid 42.65 44.09
CDY69281 Canola cytosol 21.22 43.88
GSMUA_Achr1P09740_001 Banana plastid 33.06 43.67
GSMUA_Achr2P05270_001 Banana mitochondrion 26.94 43.42
HORVU6Hr1G035370.1 Barley cytosol, plastid 42.65 42.48
TraesCS6A01G173600.1 Wheat cytosol 42.65 42.39
CDX79438 Canola cytosol, golgi, nucleus 21.02 42.39
EES00287 Sorghum plastid 41.63 42.32
TraesCS6D01G162700.1 Wheat cytosol 42.45 42.28
Zm00001d037298_P001 Maize cytosol, peroxisome, plastid 40.41 42.22
TraesCS6B01G201500.1 Wheat cytosol, plastid 42.24 41.99
Os02t0188000-01 Rice plasma membrane 36.33 41.59
EER89599 Sorghum cytosol, golgi, plastid 40.0 41.53
CDY67861 Canola extracellular, golgi 21.84 41.47
Zm00001d015623_P001 Maize cytosol 40.41 40.33
Zm00001d053715_P001 Maize extracellular 40.82 40.0
Os01t0686200-01 Rice golgi 34.49 39.67
Zm00001d009484_P001 Maize golgi, mitochondrion, plastid 37.14 39.14
EES19914 Sorghum golgi, plastid 37.55 38.98
Zm00001d039891_P001 Maize golgi, mitochondrion 35.71 38.89
KXG31912 Sorghum plastid 36.33 38.2
HORVU3Hr1G063660.1 Barley plastid 34.9 37.58
TraesCS3A01G264200.1 Wheat plastid 35.1 37.31
TraesCS1B01G399100.1 Wheat golgi, plastid 35.31 37.28
Os01t0686300-01 Rice cytosol 36.12 37.03
TraesCS3B01G297600.1 Wheat plastid 34.69 36.88
CDX76864 Canola cytosol 33.67 36.59
TraesCS1A01G378300.1 Wheat golgi, plastid 34.9 36.46
CDY15551 Canola cytosol 27.76 36.17
CDY46082 Canola plastid 33.88 36.01
Zm00001d043829_P001 Maize plastid 35.31 35.97
CDX76863 Canola plastid 33.67 35.79
CDY67489 Canola plastid 28.78 35.79
OQU84527 Sorghum plastid 40.82 35.71
CDY46083 Canola cytosol 32.86 35.7
TraesCS1D01G385300.1 Wheat plastid 34.49 35.65
CDX84760 Canola cytosol 32.86 35.38
CDX79437 Canola plastid 32.65 35.16
OQU86341 Sorghum cytosol, golgi 27.96 35.13
TraesCS3D01G264300.1 Wheat cytosol 35.1 35.1
CDY70064 Canola cytosol 29.8 35.1
CDY44260 Canola cytosol, mitochondrion, peroxisome, plastid 31.63 34.99
TraesCS1B01G399200.1 Wheat cytosol 36.33 34.97
CDX83456 Canola cytosol, golgi, plastid 31.84 34.9
Os05t0552700-01 Rice golgi, mitochondrion, plastid 36.94 34.67
CDY27124 Canola cytosol, mitochondrion, peroxisome, plastid 32.04 34.58
CDX95572 Canola cytosol, nucleus, peroxisome 27.35 34.27
CDY22902 Canola cytosol 32.24 34.2
CDY12370 Canola cytosol, mitochondrion, peroxisome, plastid 31.84 34.14
CDY09070 Canola cytosol, peroxisome, plastid 30.41 34.1
CDY19104 Canola cytosol, peroxisome, plastid 31.63 33.99
CDY65144 Canola cytosol 32.04 33.98
CDY64375 Canola plastid 32.45 33.54
CDY09069 Canola plastid 32.24 33.47
CDY64614 Canola mitochondrion 30.61 33.41
CDY09068 Canola cytosol, peroxisome, plastid 31.43 33.33
CDY15370 Canola cytosol, golgi, plastid 31.02 33.33
CDY46180 Canola mitochondrion, plastid 31.02 33.33
CDY22742 Canola cytosol 31.43 33.26
CDX79798 Canola cytosol, nucleus, peroxisome 30.61 33.26
CDY51326 Canola golgi, plastid 30.82 33.11
CDY47274 Canola plastid 31.84 33.05
CDY10124 Canola plastid 31.43 33.05
CDX83455 Canola mitochondrion 30.2 32.96
CDY65158 Canola mitochondrion 30.2 32.96
CDX92022 Canola plastid 31.63 32.84
CDY21979 Canola plastid 31.63 32.84
CDY64613 Canola mitochondrion 30.0 32.81
CDY10139 Canola golgi, plastid 30.2 32.67
CDX79797 Canola mitochondrion, plastid 29.8 32.52
CDY34513 Canola cytosol, golgi, plastid 30.2 32.46
CDY71964 Canola mitochondrion, plastid 31.02 32.34
CDY42069 Canola cytosol, golgi, plastid 30.0 32.24
CDX68805 Canola plastid 28.37 32.1
CDY31602 Canola plastid 28.98 31.98
CDY17908 Canola cytosol 29.39 31.93
CDY17907 Canola mitochondrion, plastid 29.18 31.85
CDY22741 Canola plastid 28.78 31.76
CDY60796 Canola plastid 28.78 30.26
CDY16245 Canola plastid 28.57 29.98
CDY65159 Canola cytosol 17.76 29.39
CDY67862 Canola plastid 12.04 27.06
CDY09754 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 30.0 26.44
CDX90584 Canola golgi 26.12 22.26
Protein Annotations
EnsemblPlants:CDX90587EnsemblPlantsGene:GSBRNA2T00151224001Gene3D:3.40.50.2000GO:A0A078DNN4GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016758InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CS
PANTHER:PTHR11926PANTHER:PTHR11926:SF515PFAM:PF00201ProteinID:CDX90587ProteinID:CDX90587.1ScanProsite:PS00375
SEG:segSUPFAM:SSF53756UniParc:UPI0004EE2487MapMan:50.2.4::
Description
BnaA03g41940D
Coordinates
chrLK031863:+:970489..971961
Molecular Weight (calculated)
54571.3 Da
IEP (calculated)
5.507
GRAVY (calculated)
-0.163
Length
490 amino acids
Sequence
(BLAST)
001: MGSISGMEFE SSPSPTPVHV MLVSFQGQGH VNPLLRLGKL IASKGALVTF VTTELWGKKM RQANKIVDGE LKPVGSGSLR FEFFDEEWAD DDDRRGDFLL
101: YISHLEQVGK KEVSKLVRRY EEANEPVSCL INNPFIPWVC HVAEEFNIPC AVLWVQSCAC LSAYYHYQNG TVSFPTETEP ELDVKLPCVP RLKHDEIPSF
201: LHPSSRFAGF RQAILGQFEN LSKSFCVLVD SFDALEQEVV DYMSNLCPIK TVGPLFKVAK TVTSEVSGDI CKPADQCLQW LDSRPRSSVV YISFGTVAYL
301: KQEQIEEIAH GVLKAGLSFL WVFRPPPHDL KVETHVLPQE LKEECGRGNG KIVDWCPQEQ VLAHPSVACF VTHCGWNSTM EALSLGVPVV CCPQWGDQVT
401: DAVYLIDVFK TGVRLGRGAT EERVVPREEV AEKLLEATVG EKAEELRKNA LKWKAEAEAA VAPGGSSDKN FREFVERLGV GASKVKENRH
Best Arabidopsis Sequence Match ( AT4G15480.1 )
(BLAST)
001: MGSISEMVFE TCPSPNPIHV MLVSFQGQGH VNPLLRLGKL IASKGLLVTF VTTELWGKKM RQANKIVDGE LKPVGSGSIR FEFFDEEWAE DDDRRADFSL
101: YIAHLESVGI REVSKLVRRY EEANEPVSCL INNPFIPWVC HVAEEFNIPC AVLWVQSCAC FSAYYHYQDG SVSFPTETEP ELDVKLPCVP VLKNDEIPSF
201: LHPSSRFTGF RQAILGQFKN LSKSFCVLID SFDSLEQEVI DYMSSLCPVK TVGPLFKVAR TVTSDVSGDI CKSTDKCLEW LDSRPKSSVV YISFGTVAYL
301: KQEQIEEIAH GVLKSGLSFL WVIRPPPHDL KVETHVLPQE LKESSAKGKG MIVDWCPQEQ VLSHPSVACF VTHCGWNSTM ESLSSGVPVV CCPQWGDQVT
401: DAVYLIDVFK TGVRLGRGAT EERVVPREEV AEKLLEATVG EKAEELRKNA LKWKAEAEAA VAPGGSSDKN FREFVEKLGA GVTKTKDNGY
Arabidopsis Description
UGT84A1UDP-glycosyltransferase 84A1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF20]
SUBAcon: [golgi,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.