Factsheet for Solyc12g096870.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
mitochondrion 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075458	Potato	golgi, plastid	91.77	91.77
VIT_03s0180g00200.t01	Wine grape	plastid	57.2	58.04
VIT_03s0180g00320.t01	Wine grape	plastid	57.0	57.83
VIT_03s0091g00040.t01	Wine grape	plastid	55.97	56.9
Solyc01g107560.2.1	Tomato	plastid	54.32	54.21
Solyc08g014050.1.1	Tomato	cytosol, golgi	54.32	54.1
Bra039547.1-P	Field mustard	cytosol, plastid	50.41	51.47
CDY22916	Canola	cytosol, plastid	49.59	50.63
KRG91016	Soybean	cytosol	50.0	50.62
Bra012784.1-P	Field mustard	plastid	50.41	50.0
CDX90587	Canola	cytosol	50.41	50.0
CDY49298	Canola	plastid	38.89	49.87
AT4G15480.1	Thale cress	cytosol, golgi, nucleus	50.21	49.8
AT4G15500.1	Thale cress	cytosol	48.56	49.68
CDY09758	Canola	cytosol	49.79	49.39
CDY49300	Canola	cytosol	47.94	48.34
Bra039545.1-P	Field mustard	cytosol	47.74	48.03
CDY22915	Canola	cytosol	47.53	47.93
AT4G15490.1	Thale cress	cytosol, golgi, plastid	46.71	47.39
CDY54974	Canola	cytosol, golgi, plastid	40.95	47.27
CDY54975	Canola	mitochondrion, plastid	46.09	46.38
GSMUA_AchrUn_...	Banana	cytosol, golgi, mitochondrion, plastid	21.4	45.61
CDY37279	Canola	cytosol	46.3	45.27
CDY38624	Canola	plastid	46.3	45.27
CDY19291	Canola	cytosol	45.88	44.87
Bra023872.1-P	Field mustard	cytosol	45.88	44.87
Bra031290.1-P	Field mustard	plastid	45.88	44.87
CDY44326	Canola	plastid	45.88	44.87
AT3G21560.1	Thale cress	cytosol, golgi	45.47	44.56
Solyc08g006380.2.1	Tomato	cytosol	24.49	43.27
Solyc08g006360.1.1	Tomato	cytosol	19.75	42.86
GSMUA_Achr1P09740_001	Banana	plastid	32.51	42.59
GSMUA_Achr2P05270_001	Banana	mitochondrion	26.54	42.43
Solyc05g006150.1.1	Tomato	cytosol, plastid	15.64	41.53
EES00287	Sorghum	plastid	40.74	41.08
TraesCS6A01G173600.1	Wheat	cytosol	41.15	40.57
HORVU6Hr1G035370.1	Barley	cytosol, plastid	40.95	40.45
Os02t0188000-01	Rice	plasma membrane	35.6	40.42
TraesCS6B01G201500.1	Wheat	cytosol, plastid	40.95	40.37
EER89599	Sorghum	cytosol, golgi, plastid	39.09	40.25
TraesCS6D01G162700.1	Wheat	cytosol	40.74	40.24
Zm00001d037298_P001	Maize	cytosol, peroxisome, plastid	38.68	40.09
HORVU3Hr1G096330.1	Barley	plastid	39.09	40.08
Zm00001d015623_P001	Maize	cytosol	39.71	39.31
Zm00001d053715_P001	Maize	extracellular	39.92	38.8
Solyc08g006330.2.1	Tomato	plastid	35.6	37.94
Solyc05g006140.1.1	Tomato	cytosol	17.49	37.78
Solyc08g006350.2.1	Tomato	plastid	35.39	37.72
Zm00001d009484_P001	Maize	golgi, mitochondrion, plastid	35.6	37.2
Solyc08g006410.2.1	Tomato	plastid	34.98	37.12
HORVU3Hr1G063660.1	Barley	plastid	33.74	36.04
EES19914	Sorghum	golgi, plastid	34.98	36.02
Solyc09g092500.1.1	Tomato	plastid	34.57	35.74
TraesCS3A01G264200.1	Wheat	plastid	33.74	35.57
Os01t0686200-01	Rice	golgi	31.07	35.45
Solyc12g096830.1.1	Tomato	cytosol, golgi, nucleus	32.92	35.32
OQU86341	Sorghum	cytosol, golgi	28.19	35.13
OQU84527	Sorghum	plastid	40.33	35.0
KXG31912	Sorghum	plastid	33.54	34.98
TraesCS3B01G297600.1	Wheat	plastid	32.92	34.71
Solyc12g098590.1.1	Tomato	cytosol, golgi, plastid	33.54	34.68
Solyc04g082860.1.1	Tomato	cytosol	33.13	34.62
Zm00001d039891_P001	Maize	golgi, mitochondrion	31.89	34.44
TraesCS1A01G378300.1	Wheat	golgi, plastid	33.13	34.33
TraesCS1B01G399100.1	Wheat	golgi, plastid	32.72	34.27
TraesCS1D01G385300.1	Wheat	plastid	33.13	33.97
Os01t0686300-01	Rice	cytosol	33.33	33.89
Solyc12g096820.1.1	Tomato	plastid	32.3	33.84
Zm00001d043829_P001	Maize	plastid	33.33	33.68
TraesCS3D01G264300.1	Wheat	cytosol	33.95	33.67
TraesCS1B01G399200.1	Wheat	cytosol	34.77	33.2
Solyc08g062220.2.1	Tomato	cytosol, golgi, plastid	31.07	32.83
Solyc05g053820.2.1	Tomato	golgi, plastid	30.45	32.31
Solyc01g066140.1.1	Tomato	golgi	16.67	32.27
Solyc12g098580.1.1	Tomato	mitochondrion, plastid	30.66	32.04
Solyc06g007650.1.1	Tomato	cytosol, golgi, plastid	30.04	31.74
Os05t0552700-01	Rice	golgi, mitochondrion, plastid	33.54	31.23
Solyc09g092480.1.1	Tomato	cytosol, golgi, nucleus, plastid	30.04	31.2
Solyc07g008230.1.1	Tomato	golgi	29.84	31.12
Solyc12g098600.1.1	Tomato	plastid	29.01	30.45
Solyc01g066100.1.1	Tomato	cytosol, golgi, nucleus	28.81	29.35
Solyc03g058370.1.1	Tomato	mitochondrion	20.16	28.41
Solyc01g066110.1.1	Tomato	cytosol, golgi, nucleus	20.37	25.06

Protein Annotations

Gene3D:3.40.50.2000	MapMan:50.2.4	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016758
GO:GO:0043231	GO:GO:0080043	GO:GO:0080044	UniProt:K4DHG0	PFAM:PF00201	PANTHER:PTHR11926
PANTHER:PTHR11926:SF515	SUPFAM:SSF53756	EnsemblPlantsGene:Solyc12g096870.1	EnsemblPlants:Solyc12g096870.1.1	InterPro:UDP_glucos_trans	UniParc:UPI0002769ECA

Description

No Description!

Coordinates

chr12:+:65622881..65624341

Molecular Weight (calculated)

54881.0 Da

IEP (calculated)

5.361

GRAVY (calculated)

-0.174

Length

486 amino acids

Sequence
(BLAST)

001: MSSPSQNTKS SLVHVFLVSF HGQGNVNPFL RLAKRLASKG MLVTFCAPEL VGKEMRAVNM NLIIDQPTPY GDGMIRFEFF EDGSSDQSII EDFDLRMQML
101: EQTGRRNLTK ILKKQDDEGR PVSCIVHNPF FPWVCEISES LGIPNALLWI QSCACFSIYY HYNFNLVPFP SELEPEKDVI LPSMPVLKHD DLPTFLLKSS
201: GFELVLKRIM LNQFNNLSKP FCVLVDSFQE LEHEVVRHMS KICPIRTIGP LLFNDPEIVS HIRGDCTNIE EDCIEWLDSR PTSSVVYISF GSVAVPDQEQ
301: TDEIAFGLLN SGISFLWVMK PTPGYSVFQP VVLPDGFLSK VDGRGKIVKW CPQEQVLSHP STAFFLTHCG WNSSMEAISS GVPIIAYPQW GDQATNAKYL
401: VDVFKMGIRL SKDENGSKII RREEIEKCLR EATSDDSKVA EMIENARKWK KQAEEAVAER GSSAINIQAF VDELKNIHAK KQQENA

Best Arabidopsis Sequence Match ( AT4G15480.1 )
(BLAST)

001: MGSISEMVFE TCPSPNPIHV MLVSFQGQGH VNPLLRLGKL IASKGLLVTF VTTELWGKKM RQANKIVDGE LKPVGSGSIR FEFFDEEWAE DDDRRADFSL
101: YIAHLESVGI REVSKLVRRY EEANEPVSCL INNPFIPWVC HVAEEFNIPC AVLWVQSCAC FSAYYHYQDG SVSFPTETEP ELDVKLPCVP VLKNDEIPSF
201: LHPSSRFTGF RQAILGQFKN LSKSFCVLID SFDSLEQEVI DYMSSLCPVK TVGPLFKVAR TVTSDVSGDI CKSTDKCLEW LDSRPKSSVV YISFGTVAYL
301: KQEQIEEIAH GVLKSGLSFL WVIRPPPHDL KVETHVLPQE LKESSAKGKG MIVDWCPQEQ VLSHPSVACF VTHCGWNSTM ESLSSGVPVV CCPQWGDQVT
401: DAVYLIDVFK TGVRLGRGAT EERVVPREEV AEKLLEATVG EKAEELRKNA LKWKAEAEAA VAPGGSSDKN FREFVEKLGA GVTKTKDNGY

Arabidopsis Description

UGT84A1UDP-glycosyltransferase 84A1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF20]
SUBAcon: [golgi,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.