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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plasma membrane 1
  • plastid 1
  • nucleus 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, nucleus
Any Predictor:cytosol, golgi, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc04g076970.2.1
Solyc05g013950.1.1
Solyc05g054760.2.1
Solyc06g075520.2.1
Solyc09g056180.2.1
Solyc11g039930.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G05680.1 Solyc05g013950.1.1 AT1G19570.1 21798944
AT1G05680.1 Solyc05g054760.2.1 AT1G19570.1 21798944
AT1G05680.1 Solyc06g075520.2.1 AT1G19570.1 21798944
AT1G05680.1 Solyc09g056180.2.1 AT1G19570.1 21798944
AT1G05680.1 Solyc11g039930.1.1 AT1G19570.1 21798944
AT2G31790.1 Solyc04g076970.2.1 AT1G58330.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400075461 Potato cytosol, golgi, plastid 94.92 95.34
Solyc12g096820.1.1 Tomato plastid 75.72 73.92
VIT_05s0094g01020.t01 Wine grape cytosol, nucleus, plastid 23.4 60.23
Solyc08g006360.1.1 Tomato cytosol 29.14 58.93
Solyc08g006380.2.1 Tomato cytosol 34.44 56.73
VIT_05s0094g01000.t01 Wine grape plastid 55.41 55.41
CDY69281 Canola cytosol 28.7 54.85
CDX79438 Canola cytosol, golgi, nucleus 29.36 54.73
VIT_05s0094g01040.t01 Wine grape mitochondrion 50.77 53.61
VIT_05s0094g01060.t01 Wine grape cytosol 34.66 53.22
VIT_05s0094g01050.t01 Wine grape cytosol 53.64 52.94
Zm00001d006145_P001 Maize cytosol 27.37 52.1
CDY67861 Canola extracellular, golgi 29.58 51.94
Solyc05g006150.1.1 Tomato cytosol, plastid 20.75 51.37
Solyc05g006140.1.1 Tomato cytosol 25.39 51.11
TraesCS2D01G054000.1 Wheat cytosol 25.83 49.58
Solyc08g006410.2.1 Tomato plastid 50.11 49.56
Zm00001d029620_P001 Maize cytosol 20.97 49.48
Solyc08g006330.2.1 Tomato plastid 49.45 49.12
Solyc08g006350.2.1 Tomato plastid 49.23 48.9
CDY15551 Canola cytosol 39.96 48.14
AT1G05680.1 Thale cress golgi, mitochondrion, plastid 47.02 47.02
Bra030620.1-P Field mustard cytosol, golgi, plastid 47.02 47.02
CDY70064 Canola cytosol 43.05 46.88
Bra015448.1-P Field mustard golgi, plastid 46.8 46.8
CDY10139 Canola golgi, plastid 46.58 46.58
AT1G05675.1 Thale cress cytosol, golgi, plastid 46.36 46.36
TraesCS2B01G088900.1 Wheat cytosol, mitochondrion, peroxisome 24.06 46.19
GSMUA_Achr11P... Banana cytosol 39.96 46.17
TraesCS2A01G056300.1 Wheat cytosol 23.84 45.96
CDY51326 Canola golgi, plastid 45.92 45.61
Solyc06g007650.1.1 Tomato cytosol, golgi, plastid 46.14 45.43
Solyc04g082860.1.1 Tomato cytosol 45.47 44.3
Solyc08g062220.2.1 Tomato cytosol, golgi, plastid 44.81 44.13
Bra022864.1-P Field mustard cytosol 44.15 43.96
CDX84760 Canola cytosol 44.15 43.96
Bra021743.1-P Field mustard cytosol, golgi, plastid 44.15 43.86
Bra021740.1-P Field mustard plastid 43.93 43.64
CDY19104 Canola cytosol, peroxisome, plastid 43.93 43.64
CDX79437 Canola plastid 43.71 43.52
CDY15370 Canola cytosol, golgi, plastid 43.71 43.42
AT2G31790.1 Thale cress cytosol, golgi, plastid 43.49 43.11
TraesCS2B01G068600.1 Wheat cytosol 27.37 43.06
CDY34513 Canola cytosol, golgi, plastid 42.6 42.32
CDY42069 Canola cytosol, golgi, plastid 42.6 42.32
CDY64375 Canola plastid 43.93 41.98
TraesCS2B01G088400.1 Wheat cytosol 28.7 41.27
AT2G31750.2 Thale cress plastid 44.59 41.22
Bra005641.1-P Field mustard mitochondrion 39.51 41.15
EER94182 Sorghum mitochondrion 42.16 40.99
Zm00001d006140_P001 Maize cytosol, golgi, plastid 39.74 40.91
GSMUA_Achr4P17780_001 Banana plastid 34.22 40.9
TraesCS6D01G323100.1 Wheat cytosol 41.28 40.74
Zm00001d021167_P001 Maize cytosol 42.16 40.64
TraesCS5D01G311900.1 Wheat cytosol 40.84 40.3
TraesCS5B01G435300.1 Wheat cytosol, peroxisome, plastid 40.62 40.26
HORVU5Hr1G037980.2 Barley mitochondrion 30.46 40.12
TraesCS6D01G323200.1 Wheat cytosol 40.62 40.09
EER99195 Sorghum plastid 41.28 40.04
TraesCS5A01G304900.1 Wheat cytosol 40.4 39.87
TraesCS5B01G305300.1 Wheat cytosol 40.4 39.87
Zm00001d021168_P001 Maize plastid 41.5 39.83
TraesCS6B01G374800.1 Wheat cytosol 32.89 39.52
EER99196 Sorghum plastid 41.94 39.5
TraesCS5A01G305100.1 Wheat cytosol 41.06 39.32
TraesCS5B01G305500.1 Wheat cytosol 41.06 39.32
EER97052 Sorghum cytosol, peroxisome, plastid 40.62 39.23
TraesCS5D01G312100.1 Wheat cytosol 40.62 38.9
HORVU2Hr1G012340.2 Barley cytosol 32.45 38.79
TraesCS2D01G046200.1 Wheat cytosol, peroxisome, plastid 40.4 38.77
TraesCS2A01G073500.1 Wheat cytosol, golgi 38.41 38.75
TraesCS4A01G279400.1 Wheat plastid 38.63 38.72
TraesCS3B01G282600.1 Wheat plastid 38.63 38.63
HORVU5Hr1G079680.2 Barley cytosol, peroxisome 41.06 38.59
HORVU2Hr1G114190.1 Barley cytosol, peroxisome 39.96 38.35
TraesCS5B01G305600.1 Wheat cytosol 38.41 38.33
EER92066 Sorghum cytosol 40.4 38.2
Os09t0518200-01 Rice cytosol, peroxisome, plastid 39.51 38.17
TraesCS6D01G323800.1 Wheat cytosol 39.07 37.98
KXG38625 Sorghum plastid 33.55 37.91
Zm00001d006137_P001 Maize cytosol 39.74 37.89
TraesCS2B01G068700.1 Wheat cytosol 38.63 37.88
Zm00001d033580_P001 Maize plastid 39.29 37.79
Solyc09g092500.1.1 Tomato plastid 39.07 37.66
Os04t0206000-00 Rice mitochondrion 29.58 37.64
TraesCS2D01G055000.1 Wheat cytosol 38.63 37.55
Zm00001d025036_P003 Maize extracellular 36.42 37.41
Os09t0518000-00 Rice cytosol 41.28 37.4
TraesCS2A01G054200.1 Wheat plastid 39.07 37.34
Zm00001d004366_P001 Maize plastid 38.63 37.31
TraesCS2D01G072600.1 Wheat cytosol 37.97 37.31
EES11834 Sorghum plastid 38.63 37.16
TraesCS5A01G149600.1 Wheat plastid 38.63 36.84
Zm00001d025037_P001 Maize cytosol 39.29 36.78
Zm00001d008795_P001 Maize extracellular 38.63 36.76
TraesCS2D01G053600.1 Wheat mitochondrion 33.55 36.72
TraesCS5B01G148300.1 Wheat plastid 38.41 36.63
Os09t0517900-01 Rice cytosol 38.85 36.51
Os04t0206500-01 Rice cytosol, peroxisome, plastid 37.09 36.36
Os04t0206700-01 Rice plasma membrane 39.29 36.33
Os04t0206600-01 Rice plastid 37.31 36.27
TraesCS2D01G054800.1 Wheat cytosol, peroxisome, plastid 34.44 36.19
HORVU5Hr1G079670.1 Barley cytosol 37.97 36.13
TraesCS2A01G056400.1 Wheat cytosol 37.53 36.09
TraesCS5B01G305400.1 Wheat cytosol 37.97 36.06
TraesCS5D01G312000.1 Wheat cytosol 37.97 36.06
EER97051 Sorghum cytosol 39.29 36.03
TraesCS5B01G072300.1 Wheat cytosol, peroxisome, plastid 36.87 35.99
TraesCS5A01G305000.1 Wheat cytosol 37.97 35.98
TraesCS2A01G056100.1 Wheat cytosol, peroxisome, plastid 37.31 35.96
HORVU1Hr1G068800.1 Barley mitochondrion 35.1 35.89
TraesCS4D01G030900.2 Wheat plastid 39.96 35.84
HORVU5Hr1G047150.3 Barley plastid 37.53 35.79
TraesCS2D01G054900.2 Wheat cytosol, peroxisome, plastid 38.19 35.52
OQU92304 Sorghum plastid 36.2 35.42
TraesCS4D01G031500.1 Wheat plastid 39.07 35.4
TraesCS5A01G065500.1 Wheat cytosol 36.2 35.34
Os03t0693600-00 Rice plastid 40.18 35.34
TraesCS4B01G033000.1 Wheat plastid 39.29 35.32
EER93634 Sorghum plastid 38.19 35.16
TraesCS5D01G143300.1 Wheat plastid 30.24 35.13
Solyc01g066140.1.1 Tomato golgi 19.43 35.06
Solyc09g092480.1.1 Tomato cytosol, golgi, nucleus, plastid 36.2 35.04
Solyc12g098590.1.1 Tomato cytosol, golgi, plastid 35.98 34.68
KXG36016 Sorghum cytosol 28.7 34.57
TraesCS7B01G413300.1 Wheat mitochondrion 30.02 33.83
Solyc05g053820.2.1 Tomato golgi, plastid 34.0 33.62
Solyc12g098580.1.1 Tomato mitochondrion, plastid 34.44 33.55
Os04t0204100-00 Rice plastid 26.71 33.33
Os04t0204000-00 Rice plastid 26.05 32.96
Solyc12g096870.1.1 Tomato plastid 35.32 32.92
TraesCS5D01G076400.1 Wheat peroxisome 37.09 32.88
Solyc07g008230.1.1 Tomato golgi 33.77 32.83
Solyc12g098600.1.1 Tomato plastid 33.33 32.61
Zm00001d029619_P001 Maize plastid 31.13 32.56
HORVU2Hr1G008980.13 Barley cytosol 35.98 32.34
Solyc01g107560.2.1 Tomato plastid 34.44 32.03
Os04t0203600-00 Rice cytosol 26.49 31.75
CDY67862 Canola plastid 15.23 31.65
Solyc03g058370.1.1 Tomato mitochondrion 24.06 31.59
Os04t0206450-01 Rice mitochondrion 23.18 31.34
Solyc01g066100.1.1 Tomato cytosol, golgi, nucleus 32.67 31.03
TraesCS2B01G067600.2 Wheat cytosol 26.27 30.99
Solyc08g014050.1.1 Tomato cytosol, golgi 32.89 30.53
VIT_05s0094g01030.t01 Wine grape cytosol 54.3 29.5
Solyc01g066110.1.1 Tomato cytosol, golgi, nucleus 23.84 27.34
Os11t0145200-01 Rice plasma membrane 28.7 26.97
Os11t0145100-00 Rice cytosol 0.22 0.39
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758
GO:GO:0043231GO:GO:0080043GO:GO:0080044UniProt:K4DHF6PFAM:PF00201ScanProsite:PS00375
PANTHER:PTHR11926PANTHER:PTHR11926:SF524SUPFAM:SSF53756EnsemblPlantsGene:Solyc12g096830.1EnsemblPlants:Solyc12g096830.1.1InterPro:UDP_glucos_trans
InterPro:UDP_glycos_trans_CSUniParc:UPI0002769EC6::::
Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:K4DHF6]
Coordinates
chr12:+:65588177..65590134
Molecular Weight (calculated)
51579.3 Da
IEP (calculated)
5.520
GRAVY (calculated)
-0.143
Length
453 amino acids
Sequence
(BLAST)
001: MEEKTNKSHV LVLPFPVQGH INPMVQFSKR LTSKESVKVT LITIDSVTKS MPILESSSIK IHSIPHNDET PPQSYDLFLE WFHVLVSKNF TKIVEELSDS
101: EYPVKVLVFD SITTWAIDLA HDLGLKGAAF FTQSCALSVV YYHMDPEKNK ICVFDDDDGV CLPSLPLLQK QDLPSFVCQT DLYPSLKKLV FSRNINFKKA
201: DWLLFNSFDV LEKEVISWLR TQCRIKTIGP LIPSMYLDKR LKDDKEYGLS LFKPNSETCM KWLDSREIGS VVYVSFGSLA NLGEQQMEEL ASGLMMSDFY
301: FLWVVRVTEE NKLTEEFMSK PKEKCLIVNW CPQLDVLSHQ AVGCFFTHCG WNSTLEALSL GVPMVAMPQW SDQPTNAKFI SDVWQTGVRV KAGENGVVNR
401: DEIASSVRRV MREEEGIMLK ENAIKWKKLA KEAVDEGGSS NKNIEEFLKL VIN
Best Arabidopsis Sequence Match ( AT2G31790.1 )
(BLAST)
001: MSEAKKGHVL FFPYPLQGHI NPMIQLAKRL SKKGITSTLI IASKDHREPY TSDDYSITVH TIHDGFFPHE HPHAKFVDLD RFHNSTSRSL TDFISSAKLS
101: DNPPKALIYD PFMPFALDIA KDLDLYVVAY FTQPWLASLV YYHINEGTYD VPVDRHENPT LASFPGFPLL SQDDLPSFAC EKGSYPLLHE FVVRQFSNLL
201: QADCILCNTF DQLEPKVVKW MNDQWPVKNI GPVVPSKFLD NRLPEDKDYE LENSKTEPDE SVLKWLGNRP AKSVVYVAFG TLVALSEKQM KEIAMAISQT
301: GYHFLWSVRE SERSKLPSGF IEEAEEKDSG LVAKWVPQLE VLAHESIGCF VSHCGWNSTL EALCLGVPMV GVPQWTDQPT NAKFIEDVWK IGVRVRTDGE
401: GLSSKEEIAR CIVEVMEGER GKEIRKNVEK LKVLAREAIS EGGSSDKKID EFVALLT
Arabidopsis Description
UGT74C1Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q6Z8]
SUBAcon: [golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.