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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039607_P001 Maize cytosol 87.4 88.11
Zm00001d008764_P001 Maize cytosol 87.8 86.4
TraesCS3B01G137400.1 Wheat plastid 70.73 72.65
TraesCS3A01G118300.1 Wheat cytosol, peroxisome, plastid 70.53 72.14
TraesCS3D01G120200.1 Wheat cytosol, peroxisome, plastid 70.94 72.11
TraesCS3A01G118500.1 Wheat cytosol 69.31 70.6
TraesCS3B01G137600.1 Wheat cytosol 68.7 70.56
TraesCS3D01G120400.1 Wheat cytosol 69.11 70.39
Os01t0179600-01 Rice cytosol 67.28 67.97
HORVU3Hr1G021810.5 Barley mitochondrion, peroxisome, plastid 49.8 65.33
TraesCS6B01G010300.1 Wheat cytosol 53.66 61.4
TraesCS6D01G007500.1 Wheat plastid 61.38 57.41
EES19138 Sorghum plastid 56.91 53.33
GSMUA_Achr6P05390_001 Banana plastid 37.2 51.55
GSMUA_Achr6P05370_001 Banana plastid 39.43 48.99
EER88587 Sorghum plastid 48.17 48.87
GSMUA_Achr6P05380_001 Banana plastid 38.62 47.38
KXG20270 Sorghum plastid 43.29 44.28
EER89995 Sorghum mitochondrion 43.7 43.97
VIT_05s0062g00640.t01 Wine grape plastid 41.06 43.07
Solyc09g092500.1.1 Tomato plastid 40.85 42.77
VIT_05s0062g00310.t01 Wine grape plastid 36.79 42.09
VIT_05s0062g00570.t01 Wine grape plastid 38.62 41.67
KXG26366 Sorghum cytosol, peroxisome, plastid 31.3 41.62
Bra038445.1-P Field mustard plastid 38.21 41.41
CDY27124 Canola cytosol, mitochondrion, peroxisome, plastid 38.21 41.41
VIT_05s0062g00630.t01 Wine grape plastid 39.43 41.36
CDY12370 Canola cytosol, mitochondrion, peroxisome, plastid 38.41 41.36
VIT_05s0062g00460.t01 Wine grape mitochondrion, plastid 38.41 40.65
VIT_05s0062g00270.t01 Wine grape plastid 38.21 40.43
KRH42735 Soybean golgi, mitochondrion 39.02 40.17
VIT_05s0062g00700.t01 Wine grape plastid 37.8 40.09
VIT_05s0062g00740.t01 Wine grape plastid 36.38 40.04
CDY22902 Canola cytosol 37.6 40.04
VIT_05s0062g00710.t01 Wine grape plastid 37.6 39.96
CDY65144 Canola cytosol 37.4 39.83
KRH42734 Soybean golgi, mitochondrion 37.6 39.78
KXG27711 Sorghum cytosol, extracellular, golgi 40.65 39.76
VIT_05s0062g00470.t01 Wine grape plastid 37.4 39.74
VIT_05s0062g00590.t01 Wine grape plastid 37.4 39.74
VIT_05s0062g00430.t01 Wine grape mitochondrion, plastid 37.4 39.48
PGSC0003DMT400011627 Potato cytosol, golgi, plastid 37.6 39.36
VIT_05s0062g00350.t01 Wine grape plastid 37.2 39.35
Solyc12g098590.1.1 Tomato cytosol, golgi, plastid 37.4 39.15
AT4G14090.1 Thale cress plastid 35.98 38.82
PGSC0003DMT400090450 Potato cytosol 20.73 38.78
OQU82861 Sorghum cytosol 40.04 38.78
CDY09068 Canola cytosol, peroxisome, plastid 36.38 38.74
EES16515 Sorghum cytosol 40.45 38.72
KRG97360 Soybean mitochondrion 36.59 38.71
KRH58827 Soybean golgi, mitochondrion, plastid 36.18 38.7
AT4G15550.1 Thale cress plastid 37.2 38.61
Bra033494.1-P Field mustard cytosol, nucleus, peroxisome, plastid 37.4 38.57
VIT_09s0002g06590.t01 Wine grape cytosol, extracellular, golgi 31.91 38.01
CDY22742 Canola cytosol 35.57 37.8
CDY09070 Canola cytosol, peroxisome, plastid 33.54 37.76
Bra038080.1-P Field mustard cytosol, peroxisome, plastid 36.18 37.4
CDY22741 Canola plastid 33.74 37.39
CDY09069 Canola plastid 35.77 37.29
CDX68805 Canola plastid 32.72 37.18
CDX92022 Canola plastid 35.57 37.08
CDY21979 Canola plastid 35.57 37.08
CDY10124 Canola plastid 34.96 36.91
Solyc09g092480.1.1 Tomato cytosol, golgi, nucleus, plastid 34.96 36.75
VIT_05s0062g00720.t01 Wine grape plastid 29.88 36.57
PGSC0003DMT400038696 Potato mitochondrion 25.2 36.47
PGSC0003DMT400040716 Potato plastid 33.94 36.46
Solyc05g053820.2.1 Tomato golgi, plastid 33.94 36.46
KRH58828 Soybean cytosol 35.98 36.27
Solyc12g098580.1.1 Tomato mitochondrion, plastid 34.15 36.13
CDY46180 Canola mitochondrion, plastid 33.33 35.96
Bra038079.1-P Field mustard plastid 32.93 35.92
VIT_05s0062g00300.t01 Wine grape plastid 38.62 35.85
AT1G05530.1 Thale cress plastid 33.13 35.82
CDY47274 Canola plastid 34.35 35.81
Solyc07g008230.1.1 Tomato golgi 33.74 35.62
CDY31602 Canola plastid 32.11 35.59
Bra017882.1-P Field mustard plastid 33.33 35.57
Bra031483.1-P Field mustard mitochondrion, plastid 33.94 35.53
EER94182 Sorghum mitochondrion 33.54 35.41
CDY71964 Canola mitochondrion, plastid 33.74 35.32
OQU86341 Sorghum cytosol, golgi 27.85 35.13
KXG31912 Sorghum plastid 33.13 34.98
Solyc01g066140.1.1 Tomato golgi 17.68 34.66
EER97051 Sorghum cytosol 34.76 34.62
Solyc12g098600.1.1 Tomato plastid 32.32 34.34
AT1G05560.2 Thale cress plastid 36.18 34.3
EES19914 Sorghum golgi, plastid 32.72 34.11
EER99195 Sorghum plastid 32.11 33.83
PGSC0003DMT400011630 Potato cytosol, golgi, nucleus, plastid 31.5 33.77
Solyc01g066100.1.1 Tomato cytosol, golgi, nucleus 32.72 33.75
EER97052 Sorghum cytosol, peroxisome, plastid 32.11 33.69
EER89599 Sorghum cytosol, golgi, plastid 32.32 33.69
KXG36016 Sorghum cytosol 25.61 33.51
EER92066 Sorghum cytosol 32.52 33.4
EES00287 Sorghum plastid 32.52 33.2
Solyc03g058370.1.1 Tomato mitochondrion 23.17 33.04
EES11834 Sorghum plastid 30.89 32.27
EER99196 Sorghum plastid 31.5 32.22
PGSC0003DMT400031376 Potato endoplasmic reticulum, extracellular 20.93 31.99
EER93634 Sorghum plastid 31.91 31.91
PGSC0003DMT400095217 Potato cytosol, endoplasmic reticulum, nucleus 18.5 30.95
OQU92304 Sorghum plastid 29.07 30.89
KXG38625 Sorghum plastid 24.8 30.42
Solyc01g066110.1.1 Tomato cytosol, golgi, nucleus 24.19 30.13
CDY09754 Canola cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 32.93 29.14
PGSC0003DMT400017286 Potato plastid 40.24 28.65
VIT_05s0062g00400.t01 Wine grape cytosol, plastid 35.57 27.6
OQU84527 Sorghum plastid 31.1 27.32
CDX90584 Canola golgi 31.1 26.61
Bra012780.1-P Field mustard golgi 30.89 26.16
OQU76646 Sorghum nucleus 42.68 25.06
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8078774UniProt:C5XMP8EnsemblPlants:EES00187ProteinID:EES00187
ProteinID:EES00187.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231
GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF744
EnsemblPlantsGene:SORBI_3003G042900SUPFAM:SSF53756unigene:Sbi.16523InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A8451F
RefSeq:XP_002455067.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:3966341..3968202
Molecular Weight (calculated)
52925.4 Da
IEP (calculated)
4.577
GRAVY (calculated)
-0.053
Length
492 amino acids
Sequence
(BLAST)
001: MPAMVEEEVV IRGAAAAPEP EPHFLVVTFP AMGHINPARH LARRLLRATG ARVTVSTSVF ALRKMFPGAA AETEPEGHRD ASGVWYVPYS DGYDDGFDKA
101: VHDATHYMDQ IKLEGSRTLG NVLDRLRDAG RPVTLVVYTL LLSWVADVAR AHAVPAALYW IQPATVLAAY LHFFRATDGV DAAIAAAGGD PWATVRFPGL
201: PPLRVRDLPS FIVSTSENDP YAFVVDAFRQ LIELLDGEDS PSVLANTFDA MEPEGVASLR DHGVDVVPVG PVLSFLDDDD DDDAAAGGGN DLFSQDGKGY
301: LDWLDAQAPG SVVYISFGSL SVMSERQIEE VARGMSESGR PFLWVLREDN RSSEGAAPLG GERGMVVGWC DQVRVLSHPA VGCFVTHCGW NSTLESMACG
401: VPVVCVPQWT DQGTNAWLVE RIGTGVRAAV SDKDGVLEAD ELRRCLDFAT SEMVRAKAAV WREKARAAAS EGGSSERNLK AFVAKQIAGG NN
Best Arabidopsis Sequence Match ( AT4G15550.1 )
(BLAST)
001: MANNNSNSPT GPHFLFVTFP AQGHINPSLE LAKRLAGTIS GARVTFAASI SAYNRRMFST ENVPETLIFA TYSDGHDDGF KSSAYSDKSR QDATGNFMSE
101: MRRRGKETLT ELIEDNRKQN RPFTCVVYTI LLTWVAELAR EFHLPSALLW VQPVTVFSIF YHYFNGYEDA ISEMANTPSS SIKLPSLPLL TVRDIPSFIV
201: SSNVYAFLLP AFREQIDSLK EEINPKILIN TFQELEPEAM SSVPDNFKIV PVGPLLTLRT DFSSRGEYIE WLDTKADSSV LYVSFGTLAV LSKKQLVELC
301: KALIQSRRPF LWVITDKSYR NKEDEQEKEE DCISSFREEL DEIGMVVSWC DQFRVLNHRS IGCFVTHCGW NSTLESLVSG VPVVAFPQWN DQMMNAKLLE
401: DCWKTGVRVM EKKEEEGVVV VDSEEIRRCI EEVMEDKAEE FRGNATRWKD LAAEAVREGG SSFNHLKAFV DEHM
Arabidopsis Description
UGT75D1UDP-glycosyltransferase 75D1 [Source:UniProtKB/Swiss-Prot;Acc:O23406]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.