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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001009.1-P
Bra001391.1-P
Bra001649.1-P
Bra001661.1-P
Bra001865.1-P
Bra002259.1-P
Bra002260.1-P
Bra002261.1-P
Bra003163.1-P
Bra003633.1-P
Bra003882.1-P
Bra004138.1-P
Bra006033.1-P
Bra006517.1-P
Bra007038.1-P
Bra008030.1-P
Bra008385.1-P
Bra008784.1-P
Bra009081.1-P
Bra009583.1-P
Bra009713.1-P
Bra010114.1-P
Bra011818.1-P
Bra012100.1-P
Bra012247.1-P
Bra012658.1-P
Bra013634.1-P
Bra014852.1-P
Bra015538.1-P
Bra016062.1-P
Bra016455.1-P
Bra016729.1-P
Bra018184.1-P
Bra018232.1-P
Bra018379.1-P
Bra019366.1-P
Bra019722.1-P
Bra020006.1-P
Bra020060.1-P
Bra020061.1-P
Bra020062.1-P
Bra020836.1-P
Bra021214.1-P
Bra021241.1-P
Bra021681.1-P
Bra022190.1-P
Bra022356.1-P
Bra022551.1-P
Bra022853.1-P
Bra023446.1-P
Bra023598.1-P
Bra025842.1-P
Bra026231.1-P
Bra026478.1-P
Bra026904.1-P
Bra027544.1-P
Bra028469.1-P
Bra028615.1-P
Bra028932.1-P
Bra029171.1-P
Bra029697.1-P
Bra030666.1-P
Bra031351.1-P
Bra032002.1-P
Bra032196.1-P
Bra033140.1-P
Bra033737.1-P
Bra033796.1-P
Bra034166.1-P
Bra034864.1-P
Bra034914.1-P
Bra034924.1-P
Bra035006.1-P
Bra035074.1-P
Bra035909.1-P
Bra036934.1-P
Bra037560.1-P
Bra038378.1-P
Bra038472.1-P
Bra039130.1-P
Bra039506.1-P
Bra039747.1-P
Bra039987.1-P
Bra040049.1-P
Bra040146.1-P
Bra040162.1-P
Bra040213.1-P
Bra041036.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G51030.1 Bra015538.1-P AT1G06950.1 23615222
AT3G51030.1 Bra030666.1-P AT1G06950.1 23615222
AT3G51030.1 Bra020006.1-P AT1G09630.1 23615222
AT3G51030.1 Bra012247.1-P AT1G20760.1 23615222
AT3G51030.1 Bra016455.1-P AT1G20760.1 23615222
AT3G51030.1 Bra025842.1-P AT1G20760.1 23615222
AT3G51030.1 Bra032196.1-P AT1G43890.1 23615222
AT3G51030.1 Bra034924.1-P AT1G43890.1 23615222
AT3G51030.1 Bra036934.1-P AT1G43890.1 23615222
AT3G51030.1 Bra022356.1-P AT1G49240.1 23615222
AT3G51030.1 Bra037560.1-P AT1G49240.1 23615222
AT3G51030.1 Bra004138.1-P AT1G65980.1 23615222
AT3G51030.1 Bra038378.1-P AT1G65980.1 23615222
AT3G51030.1 Bra039747.1-P AT1G65980.1 23615222
AT3G51030.1 Bra003882.1-P AT1G72370.1 23615222
AT3G51030.1 Bra008030.1-P AT1G72370.1 23615222
AT3G51030.1 Bra016062.1-P AT1G72370.1 23615222
AT3G51030.1 Bra003633.1-P AT1G78900.1 23615222
AT3G51030.1 Bra008385.1-P AT1G78900.1 23615222
AT3G51030.1 Bra035074.1-P AT1G78900.1 23615222
AT3G51030.1 Bra018379.1-P AT2G29550.1 23615222
AT3G51030.1 Bra039987.1-P AT2G29550.1 23615222
AT3G51030.1 Bra018232.1-P AT2G31570.1 23615222
AT3G51030.1 Bra022853.1-P AT2G31570.1 23615222
AT3G51030.1 Bra001009.1-P AT3G01290.1 23615222
AT3G51030.1 Bra039130.1-P AT3G01290.1 23615222
AT3G51030.1 Bra032002.1-P AT3G03270.1 23615222
AT3G51030.1 Bra016729.1-P AT3G04120.1 23615222
AT3G51030.1 Bra019722.1-P AT3G04120.1 23615222
AT3G51030.1 Bra026904.1-P AT3G04120.1 23615222
AT3G51030.1 Bra040146.1-P AT3G04120.1 23615222
AT3G51030.1 Bra040213.1-P AT3G04120.1 23615222
AT3G51030.1 Bra029697.1-P AT3G08510.1 23615222
AT3G51030.1 Bra040049.1-P AT3G08510.1 23615222
AT3G51030.1 Bra001391.1-P AT3G11130.1 23615222
AT3G51030.1 Bra034166.1-P AT3G11130.1 23615222
AT3G51030.1 Bra034864.1-P AT3G11130.1 23615222
AT3G51030.1 Bra001649.1-P AT3G17020.1 23615222
AT3G51030.1 Bra021214.1-P AT3G17020.1 23615222
AT3G51030.1 Bra022190.1-P AT3G17020.1 23615222
AT3G51030.1 Bra038472.1-P AT3G17020.1 23615222
AT3G51030.1 Bra001661.1-P AT3G17390.1 23615222
AT3G51030.1 Bra021241.1-P AT3G17390.1 23615222
AT3G51030.1 Bra041036.1-P AT3G17390.1 23615222
AT3G51030.1 Bra001865.1-P AT3G22370.1 23615222
AT3G51030.1 Bra031351.1-P AT3G22370.1 23615222
AT3G51030.1 Bra028469.1-P AT3G27380.1 23615222
AT3G51030.1 Bra021681.1-P AT3G44310.1 23615222
AT3G51030.1 Bra023598.1-P AT3G44310.1 23615222
AT3G51030.1 Bra028932.1-P AT3G44310.1 23615222
AT3G51030.1 Bra035006.1-P AT3G44310.1 23615222
AT3G51030.1 Bra003163.1-P AT3G53990.1 23615222
AT3G51030.1 Bra007038.1-P AT3G53990.1 23615222
AT3G51030.1 Bra014852.1-P AT3G53990.1 23615222
AT3G51030.1 Bra033140.1-P AT4G11600.1 23615222
AT3G51030.1 Bra026231.1-P AT4G17170.1 23615222
AT3G51030.1 Bra012658.1-P AT4G17530.1 23615222
AT3G51030.1 Bra040162.1-P AT4G17530.1 23615222
AT3G51030.1 Bra013634.1-P AT4G22710.1 23615222
AT3G51030.1 Bra019366.1-P AT4G22710.1 23615222
AT3G51030.1 Bra020836.1-P AT4G22710.1 23615222
AT3G51030.1 Bra011818.1-P AT4G39990.1 23615222
AT3G51030.1 Bra009583.1-P AT5G02500.1 23615222
AT3G51030.1 Bra035909.1-P AT5G02500.1 23615222
AT3G51030.1 Bra006033.1-P AT5G09810.1 23615222
AT3G51030.1 Bra009081.1-P AT5G09810.1 23615222
AT3G51030.1 Bra028615.1-P AT5G09810.1 23615222
AT3G51030.1 Bra008784.1-P AT5G14040.1 23615222
AT3G51030.1 Bra023446.1-P AT5G14040.1 23615222
AT3G51030.1 Bra002259.1-P AT5G19760.1 23615222
AT3G51030.1 Bra020060.1-P AT5G19760.1 23615222
AT3G51030.1 Bra002260.1-P AT5G19770.1 23615222
AT3G51030.1 Bra002261.1-P AT5G19770.1 23615222
AT3G51030.1 Bra006517.1-P AT5G19770.1 23615222
AT3G51030.1 Bra020061.1-P AT5G19770.1 23615222
AT3G51030.1 Bra020062.1-P AT5G19770.1 23615222
AT3G51030.1 Bra009713.1-P AT5G23890.1 23615222
AT3G51030.1 Bra026478.1-P AT5G23890.1 23615222
AT3G51030.1 Bra027544.1-P AT5G44340.1 23615222
AT3G51030.1 Bra033737.1-P AT5G44340.1 23615222
AT3G51030.1 Bra039506.1-P AT5G44340.1 23615222
AT3G51030.1 Bra022551.1-P AT5G51480.1 23615222
AT3G51030.1 Bra029171.1-P AT5G51480.1 23615222
AT3G51030.1 Bra034914.1-P AT5G51480.1 23615222
AT3G51030.1 Bra010114.1-P AT5G62700.1 23615222
AT3G51030.1 Bra018184.1-P AT5G62700.1 23615222
AT3G51030.1 Bra033796.1-P AT5G62700.1 23615222
AT3G51030.1 Bra012100.1-P AT5G66760.1 23615222
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90669 Canola cytosol 100.0 100.0
Bra036839.1-P Field mustard cytosol 98.25 98.25
CDY28996 Canola cytosol 97.37 97.37
CDY34470 Canola cytosol 46.49 91.38
AT3G51030.1 Thale cress cytosol 90.35 90.35
KRH76717 Soybean endoplasmic reticulum, nucleus 77.19 73.33
VIT_04s0023g02700.t01 Wine grape cytosol 72.81 72.17
KRH28739 Soybean cytosol 75.44 71.67
PGSC0003DMT400009306 Potato cytosol 73.68 71.19
Solyc02g084710.2.1 Tomato extracellular 72.81 70.34
GSMUA_Achr4P22400_001 Banana cytosol, unclear 67.54 67.54
VIT_18s0001g13250.t01 Wine grape cytosol 65.79 65.79
Bra036335.1-P Field mustard cytosol 64.04 62.39
GSMUA_Achr2P17610_001 Banana cytosol 58.77 58.77
Bra014037.1-P Field mustard cytosol 59.65 57.63
Bra025762.1-P Field mustard cytosol 59.65 57.14
Bra027469.1-P Field mustard cytosol 54.39 50.41
VIT_18s0001g13240.t01 Wine grape cytosol 56.14 40.51
Bra040318.1-P Field mustard cytosol 42.11 36.92
Bra028445.1-P Field mustard cytosol 42.11 36.09
Bra031769.1-P Field mustard cytosol 37.72 34.13
Bra017898.1-P Field mustard cytosol 36.84 32.81
Bra027837.1-P Field mustard cytosol 35.96 32.03
Bra040055.1-P Field mustard cytosol 37.72 31.39
Bra014691.1-P Field mustard cytosol, mitochondrion 35.96 30.6
Bra007245.1-P Field mustard plastid 35.96 29.29
Bra003976.1-P Field mustard cytosol 35.96 29.08
Bra001346.1-P Field mustard cytosol 41.23 28.66
Bra003977.1-P Field mustard cytosol 35.09 26.85
Bra016258.1-P Field mustard cytosol 34.21 25.83
Bra023564.1-P Field mustard plastid 35.96 21.93
Bra021417.1-P Field mustard plastid 33.33 20.88
Bra040596.1-P Field mustard plastid 32.46 20.44
Protein Annotations
MapMan:10.6.1MapMan:18.7.2Gene3D:3.40.30.10EnsemblPlantsGene:Bra012872EnsemblPlants:Bra012872.1EnsemblPlants:Bra012872.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006662GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0045454GO:GO:0055114
InterPro:IPR013766UniProt:M4D8R2PFAM:PF00085PIRSF:PIRSF000077PRINTS:PR00421ScanProsite:PS00194
PFscan:PS51352PANTHER:PTHR10438PANTHER:PTHR10438:SF370SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI000254066D:::
Description
AT3G51030 (E=1e-057) ATTRX1, ATTRX H1 | ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor
Coordinates
chrA03:-:21832947..21833870
Molecular Weight (calculated)
12618.3 Da
IEP (calculated)
4.856
GRAVY (calculated)
0.060
Length
114 amino acids
Sequence
(BLAST)
001: MAGEEGQVIA CHTVEAWNEQ LQKGNDSKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV IFLKVDIDEL KSVASDWAIE SMPTFMFMKE GKIVDKVVGA
101: QKDELQSTIA KHLA
Best Arabidopsis Sequence Match ( AT3G51030.1 )
(BLAST)
001: MASEEGQVIA CHTVETWNEQ LQKANESKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV LFLKVDTDEL KSVASDWAIQ AMPTFMFLKE GKILDKVVGA
101: KKDELQSTIA KHLA
Arabidopsis Description
TRX1Thioredoxin H1 [Source:UniProtKB/Swiss-Prot;Acc:P29448]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.