Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY38768 | Canola | cytosol, plastid | 98.68 | 98.68 |
AT1G69880.1 | Thale cress | plastid | 80.79 | 82.43 |
Bra003977.1-P | Field mustard | cytosol | 74.83 | 75.84 |
Bra003976.1-P | Field mustard | cytosol | 68.87 | 73.76 |
Bra017898.1-P | Field mustard | cytosol | 41.72 | 49.22 |
Bra027837.1-P | Field mustard | cytosol | 41.72 | 49.22 |
PGSC0003DMT400045460 | Potato | cytosol | 20.53 | 45.59 |
KRH69384 | Soybean | cytosol | 38.41 | 45.31 |
KRH74753 | Soybean | cytosol | 36.42 | 44.35 |
VIT_01s0026g01460.t01 | Wine grape | cytosol | 35.1 | 43.8 |
KRH74754 | Soybean | cytosol | 36.42 | 43.65 |
Solyc05g006830.2.1 | Tomato | cytosol, plastid | 38.41 | 42.96 |
Solyc05g006870.2.1 | Tomato | cytosol | 38.41 | 42.96 |
KRH69383 | Soybean | cytosol | 35.76 | 42.52 |
Bra040318.1-P | Field mustard | cytosol | 36.42 | 42.31 |
PGSC0003DMT400045450 | Potato | cytosol | 37.75 | 42.22 |
CDY11641 | Canola | plastid | 56.95 | 41.55 |
Solyc05g006860.2.1 | Tomato | cytosol | 37.09 | 41.48 |
KRG99185 | Soybean | cytosol, plastid | 32.45 | 40.5 |
EER90722 | Sorghum | cytosol | 35.1 | 39.85 |
KRH45834 | Soybean | cytosol, plastid | 31.79 | 39.67 |
Solyc04g005810.2.1 | Tomato | plastid | 34.44 | 39.1 |
TraesCS5D01G454800.1 | Wheat | cytosol | 33.77 | 38.93 |
TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 33.77 | 38.93 |
TraesCS5A01G448200.1 | Wheat | cytosol | 33.77 | 38.93 |
HORVU5Hr1G107210.1 | Barley | cytosol | 33.77 | 38.93 |
GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 31.79 | 38.71 |
GSMUA_Achr2P17710_001 | Banana | cytosol | 32.45 | 38.58 |
Zm00001d034491_P001 | Maize | plastid | 33.77 | 38.35 |
Solyc05g006850.2.1 | Tomato | cytosol | 33.77 | 37.78 |
KRH69387 | Soybean | plastid | 33.77 | 36.96 |
Bra028445.1-P | Field mustard | cytosol | 32.45 | 36.84 |
Bra027469.1-P | Field mustard | cytosol | 29.8 | 36.59 |
Os03t0800700-01 | Rice | plastid | 31.79 | 35.82 |
KRH74748 | Soybean | plastid | 32.45 | 35.51 |
HORVU5Hr1G107170.1 | Barley | cytosol | 33.77 | 35.17 |
Bra036839.1-P | Field mustard | cytosol | 26.49 | 35.09 |
Bra025762.1-P | Field mustard | cytosol | 27.15 | 34.45 |
Bra012872.1-P | Field mustard | cytosol | 25.83 | 34.21 |
Bra036335.1-P | Field mustard | cytosol | 26.49 | 34.19 |
Os07t0190800-01 | Rice | cytosol | 31.13 | 34.06 |
GSMUA_Achr7P16980_001 | Banana | cytosol | 23.18 | 33.98 |
Bra014037.1-P | Field mustard | cytosol | 26.49 | 33.9 |
GSMUA_Achr7P12220_001 | Banana | cytosol | 23.18 | 30.17 |
Bra014691.1-P | Field mustard | cytosol, mitochondrion | 24.5 | 27.61 |
Bra007245.1-P | Field mustard | plastid | 25.17 | 27.14 |
Bra031769.1-P | Field mustard | cytosol | 20.53 | 24.6 |
Bra040055.1-P | Field mustard | cytosol | 21.85 | 24.09 |
HORVU6Hr1G018190.1 | Barley | mitochondrion | 13.91 | 22.58 |
Bra001346.1-P | Field mustard | cytosol | 24.5 | 22.56 |
Bra021417.1-P | Field mustard | plastid | 25.17 | 20.88 |
Bra023564.1-P | Field mustard | plastid | 25.83 | 20.86 |
Bra040596.1-P | Field mustard | plastid | 24.5 | 20.44 |
Protein Annotations
MapMan:10.6.1 | Gene3D:3.40.30.10 | EnsemblPlantsGene:Bra016258 | EnsemblPlants:Bra016258.1 | EnsemblPlants:Bra016258.1-P | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 |
UniProt:M4DID1 | PFAM:PF00085 | PIRSF:PIRSF000077 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
PANTHER:PTHR10438:SF243 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain |
UniParc:UPI0002541910 | : | : | : | : | : |
Description
AT1G69880 (E=7e-065) ATH8 | ATH8 (thioredoxin H-type 8)
Coordinates
chrA07:+:18613906..18614708
Molecular Weight (calculated)
17646.4 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.371
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: MGANVSSPDQ RYSVTADLPS RRPWTPRFES HISPYKVNIP LIVEIKNKNQ WKSRLNSLKH TNKLFVIEFT AKWCGPCKSL EPKVEELAAK YTDVEFVKID
101: VDVLMSVWME YNLHTLPAIV FMKRGQEVDR VVGVKFDELE RKLHKYAQSF F
101: VDVLMSVWME YNLHTLPAIV FMKRGQEVDR VVGVKFDELE RKLHKYAQSF F
001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
Arabidopsis Description
TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.