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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 4
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38768 Canola cytosol, plastid 98.68 98.68
AT1G69880.1 Thale cress plastid 80.79 82.43
Bra003977.1-P Field mustard cytosol 74.83 75.84
Bra003976.1-P Field mustard cytosol 68.87 73.76
Bra017898.1-P Field mustard cytosol 41.72 49.22
Bra027837.1-P Field mustard cytosol 41.72 49.22
PGSC0003DMT400045460 Potato cytosol 20.53 45.59
KRH69384 Soybean cytosol 38.41 45.31
KRH74753 Soybean cytosol 36.42 44.35
VIT_01s0026g01460.t01 Wine grape cytosol 35.1 43.8
KRH74754 Soybean cytosol 36.42 43.65
Solyc05g006830.2.1 Tomato cytosol, plastid 38.41 42.96
Solyc05g006870.2.1 Tomato cytosol 38.41 42.96
KRH69383 Soybean cytosol 35.76 42.52
Bra040318.1-P Field mustard cytosol 36.42 42.31
PGSC0003DMT400045450 Potato cytosol 37.75 42.22
CDY11641 Canola plastid 56.95 41.55
Solyc05g006860.2.1 Tomato cytosol 37.09 41.48
KRG99185 Soybean cytosol, plastid 32.45 40.5
EER90722 Sorghum cytosol 35.1 39.85
KRH45834 Soybean cytosol, plastid 31.79 39.67
Solyc04g005810.2.1 Tomato plastid 34.44 39.1
TraesCS5D01G454800.1 Wheat cytosol 33.77 38.93
TraesCS5B01G452700.1 Wheat cytosol, golgi, unclear 33.77 38.93
TraesCS5A01G448200.1 Wheat cytosol 33.77 38.93
HORVU5Hr1G107210.1 Barley cytosol 33.77 38.93
GSMUA_Achr9P10960_001 Banana mitochondrion, plastid 31.79 38.71
GSMUA_Achr2P17710_001 Banana cytosol 32.45 38.58
Zm00001d034491_P001 Maize plastid 33.77 38.35
Solyc05g006850.2.1 Tomato cytosol 33.77 37.78
KRH69387 Soybean plastid 33.77 36.96
Bra028445.1-P Field mustard cytosol 32.45 36.84
Bra027469.1-P Field mustard cytosol 29.8 36.59
Os03t0800700-01 Rice plastid 31.79 35.82
KRH74748 Soybean plastid 32.45 35.51
HORVU5Hr1G107170.1 Barley cytosol 33.77 35.17
Bra036839.1-P Field mustard cytosol 26.49 35.09
Bra025762.1-P Field mustard cytosol 27.15 34.45
Bra012872.1-P Field mustard cytosol 25.83 34.21
Bra036335.1-P Field mustard cytosol 26.49 34.19
Os07t0190800-01 Rice cytosol 31.13 34.06
GSMUA_Achr7P16980_001 Banana cytosol 23.18 33.98
Bra014037.1-P Field mustard cytosol 26.49 33.9
GSMUA_Achr7P12220_001 Banana cytosol 23.18 30.17
Bra014691.1-P Field mustard cytosol, mitochondrion 24.5 27.61
Bra007245.1-P Field mustard plastid 25.17 27.14
Bra031769.1-P Field mustard cytosol 20.53 24.6
Bra040055.1-P Field mustard cytosol 21.85 24.09
HORVU6Hr1G018190.1 Barley mitochondrion 13.91 22.58
Bra001346.1-P Field mustard cytosol 24.5 22.56
Bra021417.1-P Field mustard plastid 25.17 20.88
Bra023564.1-P Field mustard plastid 25.83 20.86
Bra040596.1-P Field mustard plastid 24.5 20.44
Protein Annotations
MapMan:10.6.1Gene3D:3.40.30.10EnsemblPlantsGene:Bra016258EnsemblPlants:Bra016258.1EnsemblPlants:Bra016258.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006662GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0045454GO:GO:0055114InterPro:IPR013766
UniProt:M4DID1PFAM:PF00085PIRSF:PIRSF000077ScanProsite:PS00194PFscan:PS51352PANTHER:PTHR10438
PANTHER:PTHR10438:SF243SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CSInterPro:Thioredoxin_domain
UniParc:UPI0002541910:::::
Description
AT1G69880 (E=7e-065) ATH8 | ATH8 (thioredoxin H-type 8)
Coordinates
chrA07:+:18613906..18614708
Molecular Weight (calculated)
17646.4 Da
IEP (calculated)
9.630
GRAVY (calculated)
-0.371
Length
151 amino acids
Sequence
(BLAST)
001: MGANVSSPDQ RYSVTADLPS RRPWTPRFES HISPYKVNIP LIVEIKNKNQ WKSRLNSLKH TNKLFVIEFT AKWCGPCKSL EPKVEELAAK YTDVEFVKID
101: VDVLMSVWME YNLHTLPAIV FMKRGQEVDR VVGVKFDELE RKLHKYAQSF F
Best Arabidopsis Sequence Match ( AT1G69880.1 )
(BLAST)
001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
Arabidopsis Description
TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.