Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0800700-01 | Rice | plastid | 63.77 | 65.67 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 50.72 | 55.12 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 39.13 | 52.43 |
| KRH74754 | Soybean | cytosol | 47.1 | 51.59 |
| Bra040318.1-P | Field mustard | cytosol | 47.1 | 50.0 |
| KRH01124 | Soybean | endoplasmic reticulum | 47.83 | 49.62 |
| AT5G39950.1 | Thale cress | cytosol | 47.1 | 48.87 |
| KRH69383 | Soybean | cytosol | 44.93 | 48.82 |
| CDY65333 | Canola | cytosol | 46.38 | 48.12 |
| KRH01123 | Soybean | cytosol | 42.75 | 47.97 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 42.03 | 47.93 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 46.38 | 47.41 |
| Bra028445.1-P | Field mustard | cytosol | 45.65 | 47.37 |
| KRH40137 | Soybean | endoplasmic reticulum | 44.93 | 47.33 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 46.38 | 47.06 |
| PGSC0003DMT400045460 | Potato | cytosol | 23.19 | 47.06 |
| CDX67442 | Canola | cytosol | 45.65 | 47.01 |
| Solyc05g006860.2.1 | Tomato | cytosol | 45.65 | 46.67 |
| PGSC0003DMT400045450 | Potato | cytosol | 45.65 | 46.67 |
| KRH74753 | Soybean | cytosol | 41.3 | 45.97 |
| KRH40138 | Soybean | cytosol, plastid | 41.3 | 45.6 |
| KRH45834 | Soybean | cytosol, plastid | 39.86 | 45.45 |
| KRG99185 | Soybean | cytosol, plastid | 39.86 | 45.45 |
| Solyc05g006870.2.1 | Tomato | cytosol | 44.2 | 45.19 |
| Os07t0186000-02 | Rice | extracellular | 39.86 | 45.08 |
| Solyc04g005810.2.1 | Tomato | plastid | 42.75 | 44.36 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 36.96 | 43.97 |
| KRH69384 | Soybean | cytosol | 40.58 | 43.75 |
| PGSC0003DMT400003564 | Potato | plastid | 44.93 | 43.66 |
| KRH40136 | Soybean | endoplasmic reticulum | 49.28 | 43.31 |
| Bra017898.1-P | Field mustard | cytosol | 39.13 | 42.19 |
| AT1G59730.1 | Thale cress | cytosol | 39.13 | 41.86 |
| KRH01119 | Soybean | cytosol | 42.03 | 41.43 |
| Bra027837.1-P | Field mustard | cytosol | 38.41 | 41.41 |
| CDY45144 | Canola | cytosol | 38.41 | 41.41 |
| CDY30901 | Canola | cytosol | 38.41 | 41.41 |
| CDY27290 | Canola | cytosol | 37.68 | 40.62 |
| Solyc05g006850.2.1 | Tomato | cytosol | 39.13 | 40.0 |
| KRH69387 | Soybean | plastid | 38.41 | 38.41 |
| KRH74748 | Soybean | plastid | 38.41 | 38.41 |
| CDY57101 | Canola | cytosol | 45.65 | 38.18 |
| CDY37032 | Canola | cytosol | 47.83 | 35.29 |
| Os04t0629500-01 | Rice | cytosol | 33.33 | 34.59 |
| Solyc02g087630.2.1 | Tomato | plastid | 41.3 | 33.73 |
| CDY03743 | Canola | extracellular | 21.01 | 33.72 |
| Os01t0168200-01 | Rice | plasma membrane | 31.88 | 33.59 |
| Os05t0169000-01 | Rice | cytosol | 31.16 | 32.58 |
| AT1G69880.1 | Thale cress | plastid | 34.78 | 32.43 |
| CDY23544 | Canola | cytosol | 34.78 | 32.43 |
| Bra003977.1-P | Field mustard | cytosol | 34.06 | 31.54 |
| CDY48388 | Canola | cytosol | 33.33 | 31.29 |
| Bra016258.1-P | Field mustard | cytosol | 34.06 | 31.13 |
| CDY11645 | Canola | cytosol, plastid | 34.06 | 31.13 |
| CDY38768 | Canola | cytosol, plastid | 34.06 | 31.13 |
| CDY23543 | Canola | cytosol | 31.16 | 30.71 |
| CDY48387 | Canola | cytosol | 31.16 | 30.5 |
| Bra003976.1-P | Field mustard | cytosol | 31.16 | 30.5 |
| Os12t0280050-00 | Rice | cytosol | 26.81 | 30.08 |
| CDY04457 | Canola | cytosol | 21.01 | 29.59 |
| Os05t0480200-01 | Rice | cytosol | 27.54 | 28.15 |
| Os01t0913000-01 | Rice | plastid | 29.71 | 21.93 |
| CDY11641 | Canola | plastid | 18.12 | 12.08 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | EntrezGene:4342618 | EMBL:AK241734 | ProteinID:BAC83857.1 | ProteinID:BAF21004.1 |
| ProteinID:BAT00419.1 | ProteinID:EAZ38983.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 |
| GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | EnsemblPlantsGene:Os07g0190800 |
| EnsemblPlants:Os07t0190800-01 | PFAM:PF00085 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF243 | UniProt:Q6Z4I3 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS |
| InterPro:Thioredoxin_domain | UniParc:UPI00001BF499 | RefSeq:XP_015646978.1 | SEG:seg | : | : |
Description
THIOREDOXIN H-TYPE 5Similar to Thioredoxin h. (Os07t0190800-01)
Coordinates
chr7:-:4880571..4882104
Molecular Weight (calculated)
14898.6 Da
IEP (calculated)
5.004
GRAVY (calculated)
-0.225
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGAFSTSKP KPAAGEEGGE SAVVAVHSKA KWDELWDAHK NTTKLVVIDF SASWCGPCKM MEPVFKEMAG RFTDVAFLKV DVDELAEVAR TWRVEAMPTF
101: VLARGGEEVG RIVGADKDEL EKTINTLRSS SSSTATTT
101: VLARGGEEVG RIVGADKDEL EKTINTLRSS SSSTATTT
001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
Arabidopsis Description
TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.