CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99185	Soybean	cytosol, plastid	96.69	96.69
KRH74754	Soybean	cytosol	71.07	68.25
KRH69383	Soybean	cytosol	69.42	66.14
KRH74753	Soybean	cytosol	67.77	66.13
KRH69384	Soybean	cytosol	66.94	63.28
KRH74748	Soybean	plastid	70.25	61.59
VIT_01s0026g01460.t01	Wine grape	cytosol	61.16	61.16
KRH69387	Soybean	plastid	67.77	59.42
PGSC0003DMT400045460	Potato	cytosol	32.23	57.35
Solyc05g006830.2.1	Tomato	cytosol, plastid	58.68	52.59
PGSC0003DMT400045450	Potato	cytosol	58.68	52.59
Solyc05g006860.2.1	Tomato	cytosol	58.68	52.59
Solyc05g006870.2.1	Tomato	cytosol	58.68	52.59
KRH01124	Soybean	endoplasmic reticulum	53.72	48.87
KRH40137	Soybean	endoplasmic reticulum	52.89	48.85
Solyc04g005810.2.1	Tomato	plastid	52.89	48.12
KRH51778	Soybean	endoplasmic reticulum	44.63	46.15
Solyc05g006850.2.1	Tomato	cytosol	51.24	45.93
KRH15131	Soybean	cytosol, nucleus	44.63	45.38
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	46.28	45.16
KRH28739	Soybean	cytosol	44.63	45.0
KRH61100	Soybean	cytosol	42.98	44.44
KRH76717	Soybean	endoplasmic reticulum, nucleus	43.8	44.17
KRH40138	Soybean	cytosol, plastid	44.63	43.2
KRH01123	Soybean	cytosol	42.98	42.28
GSMUA_Achr2P17710_001	Banana	cytosol	43.8	41.73
KRH05879	Soybean	endoplasmic reticulum	42.15	41.46
KRH40136	Soybean	endoplasmic reticulum	52.89	40.76
Os07t0190800-01	Rice	cytosol	45.45	39.86
HORVU5Hr1G107210.1	Barley	cytosol	42.98	39.69
TraesCS5A01G448200.1	Wheat	cytosol	42.98	39.69
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	42.15	38.93
TraesCS5D01G454800.1	Wheat	cytosol	42.15	38.93
AT1G59730.1	Thale cress	cytosol	41.32	38.76
GSMUA_Achr7P16980_001	Banana	cytosol	32.23	37.86
Zm00001d034491_P001	Maize	plastid	41.32	37.59
EER90722	Sorghum	cytosol	41.32	37.59
Os03t0800700-01	Rice	plastid	41.32	37.31
KRH10686	Soybean	cytosol	38.02	37.1
KRH21649	Soybean	cytosol, plastid	38.02	36.8
Bra017898.1-P	Field mustard	cytosol	38.02	35.94
Bra027837.1-P	Field mustard	cytosol	38.02	35.94
CDY27290	Canola	cytosol	38.02	35.94
CDY45144	Canola	cytosol	38.02	35.94
HORVU5Hr1G107170.1	Barley	cytosol	42.98	35.86
CDY30901	Canola	cytosol	37.19	35.16
KRH01119	Soybean	cytosol	39.67	34.29
AT1G69880.1	Thale cress	plastid	39.67	32.43
KRH22228	Soybean	cytosol	32.23	31.97
Bra016258.1-P	Field mustard	cytosol	39.67	31.79
CDY11645	Canola	cytosol, plastid	39.67	31.79
CDY38768	Canola	cytosol, plastid	39.67	31.79
CDY23543	Canola	cytosol	36.36	31.43
Bra003976.1-P	Field mustard	cytosol	36.36	31.21
CDY48387	Canola	cytosol	36.36	31.21
KRH27111	Soybean	nucleus	32.23	30.95
CDY23544	Canola	cytosol	37.19	30.41
Bra003977.1-P	Field mustard	cytosol	36.36	29.53
KRH09556	Soybean	cytosol	33.06	29.2
HORVU6Hr1G018190.1	Barley	mitochondrion	22.31	29.03
CDY48388	Canola	cytosol	34.71	28.57
KRH25890	Soybean	nucleus	29.75	28.57
GSMUA_Achr7P12220_001	Banana	cytosol	27.27	28.45
KRH55615	Soybean	cytosol	28.93	27.78
KRH00477	Soybean	cytosol	31.41	27.34
KRH33304	Soybean	cytosol	28.1	26.98
CDY03743	Canola	extracellular	19.01	26.74
KRH64869	Soybean	cytosol	32.23	25.49
CDY04457	Canola	cytosol	19.01	23.47
KRH40706	Soybean	mitochondrion	29.75	21.3
KRH00940	Soybean	nucleus, plastid	30.58	20.67
KRH40285	Soybean	plastid	30.58	20.44
CDY11641	Canola	plastid	18.18	10.63

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EMBL:ACUP02005286	EnsemblPlantsGene:GLYMA_08G295600	GO:GO:0003674	GO:GO:0003824
GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006662
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0016671
GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114	GO:GO:0098869
UniProt:I1KXP4	InterPro:IPR013766	EnsemblPlants:KRH45834	ProteinID:KRH45834	ProteinID:KRH45834.1	PFAM:PF00085
PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF278
SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI00023CA16D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:41047091..41048525

Molecular Weight (calculated)

13968.1 Da

IEP (calculated)

9.162

GRAVY (calculated)

-0.279

Length

121 amino acids

Sequence
(BLAST)

001: MAMAYVARSS ESSQVLTFHS TAKWNAHFDA LKQTNKLMVV DFTASWCGPC KLMDPVIQEF ATKYRDVEFV KIDVDELMEV SQHYQVQGMP TFMLLKKGKV
101: ANKVVGVRKE ELQRLIEQHR K

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.