Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 99.24 | 99.24 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 96.95 | 96.95 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 96.18 | 96.18 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 96.18 | 86.9 |
| EER90722 | Sorghum | cytosol | 75.57 | 74.44 |
| Zm00001d034491_P001 | Maize | plastid | 73.28 | 72.18 |
| Os03t0800700-01 | Rice | plastid | 70.99 | 69.4 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 61.83 | 63.78 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 45.8 | 58.25 |
| KRH01123 | Soybean | cytosol | 51.91 | 55.28 |
| KRH40137 | Soybean | endoplasmic reticulum | 54.96 | 54.96 |
| KRH01124 | Soybean | endoplasmic reticulum | 54.2 | 53.38 |
| KRH40138 | Soybean | cytosol, plastid | 49.62 | 52.0 |
| VIT_01s0026g01460.t01 | Wine grape | cytosol | 47.33 | 51.24 |
| CDY65333 | Canola | cytosol | 51.15 | 50.38 |
| Bra028445.1-P | Field mustard | cytosol | 50.38 | 49.62 |
| CDX67442 | Canola | cytosol | 50.38 | 49.25 |
| AT5G39950.1 | Thale cress | cytosol | 49.62 | 48.87 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 44.27 | 48.74 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 50.38 | 48.53 |
| Bra040318.1-P | Field mustard | cytosol | 47.33 | 47.69 |
| PGSC0003DMT400003564 | Potato | plastid | 51.15 | 47.18 |
| PGSC0003DMT400045460 | Potato | cytosol | 24.43 | 47.06 |
| KRH74754 | Soybean | cytosol | 44.27 | 46.03 |
| KRH40136 | Soybean | endoplasmic reticulum | 54.96 | 45.86 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 39.69 | 44.83 |
| KRH69383 | Soybean | cytosol | 42.75 | 44.09 |
| KRH74753 | Soybean | cytosol | 41.22 | 43.55 |
| Solyc05g006870.2.1 | Tomato | cytosol | 44.27 | 42.96 |
| Solyc04g005810.2.1 | Tomato | plastid | 43.51 | 42.86 |
| KRH01119 | Soybean | cytosol | 45.8 | 42.86 |
| Solyc05g006830.2.1 | Tomato | cytosol, plastid | 43.51 | 42.22 |
| Bra017898.1-P | Field mustard | cytosol | 41.22 | 42.19 |
| Bra027837.1-P | Field mustard | cytosol | 41.22 | 42.19 |
| CDY45144 | Canola | cytosol | 41.22 | 42.19 |
| CDY30901 | Canola | cytosol | 41.22 | 42.19 |
| KRG99185 | Soybean | cytosol, plastid | 38.93 | 42.15 |
| KRH45834 | Soybean | cytosol, plastid | 38.93 | 42.15 |
| AT1G59730.1 | Thale cress | cytosol | 41.22 | 41.86 |
| PGSC0003DMT400045450 | Potato | cytosol | 42.75 | 41.48 |
| KRH69384 | Soybean | cytosol | 40.46 | 41.41 |
| CDY27290 | Canola | cytosol | 40.46 | 41.41 |
| Solyc05g006860.2.1 | Tomato | cytosol | 41.22 | 40.0 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 34.35 | 39.82 |
| TraesCS2D01G244400.1 | Wheat | cytosol | 41.22 | 39.71 |
| CDY03743 | Canola | extracellular | 25.19 | 38.37 |
| CDY57101 | Canola | cytosol | 48.09 | 38.18 |
| Solyc05g006850.2.1 | Tomato | cytosol | 38.17 | 37.04 |
| KRH69387 | Soybean | plastid | 38.93 | 36.96 |
| Solyc02g087630.2.1 | Tomato | plastid | 47.33 | 36.69 |
| KRH74748 | Soybean | plastid | 38.17 | 36.23 |
| CDY23544 | Canola | cytosol | 39.69 | 35.14 |
| CDY04457 | Canola | cytosol | 25.95 | 34.69 |
| TraesCS1D01G114000.1 | Wheat | cytosol | 34.35 | 34.35 |
| CDY23543 | Canola | cytosol | 36.64 | 34.29 |
| Bra003976.1-P | Field mustard | cytosol | 36.64 | 34.04 |
| CDY48387 | Canola | cytosol | 36.64 | 34.04 |
| CDY38768 | Canola | cytosol, plastid | 38.93 | 33.77 |
| Bra016258.1-P | Field mustard | cytosol | 38.93 | 33.77 |
| CDY11645 | Canola | cytosol, plastid | 38.93 | 33.77 |
| Bra003977.1-P | Field mustard | cytosol | 38.17 | 33.56 |
| CDY37032 | Canola | cytosol | 47.33 | 33.16 |
| CDY48388 | Canola | cytosol | 36.64 | 32.65 |
| AT1G69880.1 | Thale cress | plastid | 35.88 | 31.76 |
| TraesCS2D01G479600.1 | Wheat | cytosol | 29.77 | 28.06 |
| TraesCS1D01G301200.1 | Wheat | cytosol | 30.53 | 27.97 |
| CDY11641 | Canola | plastid | 21.37 | 13.53 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006662 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 |
| PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF243 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain |
| EnsemblPlantsGene:TraesCS5D01G454800 | EnsemblPlants:TraesCS5D01G454800.1 | TIGR:cd02947 | : | : | : |
Description
No Description!
Coordinates
chr5D:-:501772729..501774471
Molecular Weight (calculated)
14557.4 Da
IEP (calculated)
6.258
GRAVY (calculated)
-0.110
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFLSSLWT PPPLAGDDPD SAVVAVHSKP AWDKHWEEHR NASKLMVIDF SASWCGPCRF IEPAFKEMAS RFADALFVKI DVDELAEVAK TFRVEAMPTF
101: VLVKGGQEVS RVVGAKKDEL DRKIKTFISS T
101: VLVKGGQEVS RVVGAKKDEL DRKIKTFISS T
001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
Arabidopsis Description
TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.