Factsheet for Bra040318.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37032	Canola	cytosol	99.23	68.98
Bra028445.1-P	Field mustard	cytosol	67.69	66.17
AT5G39950.1	Thale cress	cytosol	66.15	64.66
KRH01124	Soybean	endoplasmic reticulum	61.54	60.15
VIT_14s0066g02560.t01	Wine grape	cytosol	60.77	58.09
PGSC0003DMT400003564	Potato	plastid	60.0	54.93
KRH40137	Soybean	endoplasmic reticulum	53.08	52.67
KRH40136	Soybean	endoplasmic reticulum	63.08	52.23
KRH01123	Soybean	cytosol	47.69	50.41
KRH40138	Soybean	cytosol, plastid	48.46	50.4
TraesCS5A01G448200.1	Wheat	cytosol	47.69	47.33
HORVU5Hr1G107210.1	Barley	cytosol	47.69	47.33
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	47.69	47.33
TraesCS5D01G454800.1	Wheat	cytosol	47.69	47.33
Os07t0190800-01	Rice	cytosol	50.0	47.1
Os03t0800700-01	Rice	plastid	48.46	47.01
Zm00001d034491_P001	Maize	plastid	47.69	46.62
GSMUA_Achr2P17710_001	Banana	cytosol	45.38	46.46
EER90722	Sorghum	cytosol	46.15	45.11
Bra017898.1-P	Field mustard	cytosol	43.85	44.53
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	42.31	44.35
Bra027469.1-P	Field mustard	cytosol	40.77	43.09
Bra036839.1-P	Field mustard	cytosol	37.69	42.98
HORVU5Hr1G107170.1	Barley	cytosol	47.69	42.76
Bra036335.1-P	Field mustard	cytosol	38.46	42.73
Bra027837.1-P	Field mustard	cytosol	41.54	42.19
Bra012872.1-P	Field mustard	cytosol	36.92	42.11
Bra025762.1-P	Field mustard	cytosol	38.46	42.02
Bra014037.1-P	Field mustard	cytosol	37.69	41.53
Solyc02g087630.2.1	Tomato	plastid	53.08	40.83
GSMUA_Achr7P16980_001	Banana	cytosol	32.31	40.78
KRH01119	Soybean	cytosol	43.08	40.0
Bra003976.1-P	Field mustard	cytosol	40.77	37.59
Bra003977.1-P	Field mustard	cytosol	43.08	37.58
Bra016258.1-P	Field mustard	cytosol	42.31	36.42
Bra031769.1-P	Field mustard	cytosol	32.31	33.33
GSMUA_Achr7P12220_001	Banana	cytosol	28.46	31.9
Bra014691.1-P	Field mustard	cytosol, mitochondrion	30.0	29.1
HORVU6Hr1G018190.1	Barley	mitochondrion	20.77	29.03
Bra007245.1-P	Field mustard	plastid	30.77	28.57
Bra040055.1-P	Field mustard	cytosol	26.92	25.55
Bra001346.1-P	Field mustard	cytosol	30.0	23.78
Bra023564.1-P	Field mustard	plastid	27.69	19.25
Bra040596.1-P	Field mustard	plastid	26.15	18.78
Bra021417.1-P	Field mustard	plastid	26.15	18.68

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra040318	EnsemblPlants:Bra040318.1	EnsemblPlants:Bra040318.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4FGU0	PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR10438	PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000254425F	:	:	:	:

Description

AT5G39950 (E=3e-045) ATTRX2, ATH2, ATTRXH2, TRXH2 | ATTRX2 (THIOREDOXIN 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor

Coordinates

chrA04:+:18518097..18518762

Molecular Weight (calculated)

14231.9 Da

IEP (calculated)

5.611

GRAVY (calculated)

-0.318

Length

130 amino acids

Sequence
(BLAST)

001: MGTAISNMLG AGEGNESEHS GVTKLSSSAQ WQLHFNGMKD SNQLLVIDFS ASWCGPCKSF EPAVRHMAVK FTDVSFVKVD VDELPEVAKE FDVTAMPTFV
101: LMKNGKEVDR IVGAKQDELE NKVTKHRGGQ

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.