Factsheet for TraesCS5A01G448200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G107210.1	Barley	cytosol	98.47	98.47
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	97.71	97.71
TraesCS5D01G454800.1	Wheat	cytosol	96.95	96.95
HORVU5Hr1G107170.1	Barley	cytosol	98.47	88.97
EER90722	Sorghum	cytosol	76.34	75.19
Zm00001d034491_P001	Maize	plastid	74.05	72.93
Os03t0800700-01	Rice	plastid	71.76	70.15
GSMUA_Achr2P17710_001	Banana	cytosol	61.07	62.99
GSMUA_Achr7P16980_001	Banana	cytosol	45.04	57.28
KRH01123	Soybean	cytosol	51.91	55.28
KRH40137	Soybean	endoplasmic reticulum	54.2	54.2
KRH01124	Soybean	endoplasmic reticulum	53.44	52.63
KRH40138	Soybean	cytosol, plastid	49.62	52.0
VIT_01s0026g01460.t01	Wine grape	cytosol	46.56	50.41
CDY65333	Canola	cytosol	50.38	49.62
VIT_14s0066g02560.t01	Wine grape	cytosol	51.15	49.26
Bra028445.1-P	Field mustard	cytosol	49.62	48.87
CDX67442	Canola	cytosol	49.62	48.51
AT5G39950.1	Thale cress	cytosol	48.85	48.12
Bra040318.1-P	Field mustard	cytosol	47.33	47.69
PGSC0003DMT400003564	Potato	plastid	51.15	47.18
PGSC0003DMT400045460	Potato	cytosol	24.43	47.06
KRH74754	Soybean	cytosol	45.04	46.83
TraesCS2A01G243200.1	Wheat	cytosol, golgi, plastid	41.98	46.61
KRH40136	Soybean	endoplasmic reticulum	54.2	45.22
KRH74753	Soybean	cytosol	41.98	44.35
KRH69383	Soybean	cytosol	42.75	44.09
GSMUA_Achr7P12220_001	Banana	cytosol	38.93	43.97
KRH45834	Soybean	cytosol, plastid	39.69	42.98
KRG99185	Soybean	cytosol, plastid	39.69	42.98
Solyc05g006870.2.1	Tomato	cytosol	44.27	42.96
Solyc04g005810.2.1	Tomato	plastid	43.51	42.86
KRH01119	Soybean	cytosol	45.8	42.86
Solyc05g006830.2.1	Tomato	cytosol, plastid	43.51	42.22
KRH69384	Soybean	cytosol	41.22	42.19
CDY30901	Canola	cytosol	41.22	42.19
Bra017898.1-P	Field mustard	cytosol	41.22	42.19
Bra027837.1-P	Field mustard	cytosol	41.22	42.19
CDY45144	Canola	cytosol	41.22	42.19
AT1G59730.1	Thale cress	cytosol	41.22	41.86
TraesCS1A01G325600.1	Wheat	cytosol	41.22	41.54
TraesCS7A01G562100.1	Wheat	cytosol	33.59	41.51
PGSC0003DMT400045450	Potato	cytosol	42.75	41.48
CDY27290	Canola	cytosol	40.46	41.41
Solyc05g006860.2.1	Tomato	cytosol	41.22	40.0
CDY03743	Canola	extracellular	25.19	38.37
CDY57101	Canola	cytosol	48.09	38.18
KRH69387	Soybean	plastid	39.69	37.68
Solyc05g006850.2.1	Tomato	cytosol	38.17	37.04
KRH74748	Soybean	plastid	38.93	36.96
Solyc02g087630.2.1	Tomato	plastid	47.33	36.69
CDY23544	Canola	cytosol	40.46	35.81
CDY23543	Canola	cytosol	37.4	35.0
CDY48387	Canola	cytosol	37.4	34.75
Bra003976.1-P	Field mustard	cytosol	37.4	34.75
CDY04457	Canola	cytosol	25.95	34.69
TraesCS1A01G112400.1	Wheat	cytosol	34.35	34.35
Bra003977.1-P	Field mustard	cytosol	38.93	34.23
CDY38768	Canola	cytosol, plastid	38.93	33.77
Bra016258.1-P	Field mustard	cytosol	38.93	33.77
CDY11645	Canola	cytosol, plastid	38.93	33.77
CDY48388	Canola	cytosol	37.4	33.33
CDY37032	Canola	cytosol	47.33	33.16
AT1G69880.1	Thale cress	plastid	36.64	32.43
TraesCS1A01G301500.1	Wheat	cytosol	30.53	27.97
TraesCS2A01G480300.1	Wheat	cytosol	29.01	27.34
TraesCS3A01G418400.1	Wheat	plastid	31.3	21.69
CDY11641	Canola	plastid	20.61	13.04

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF243	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
EnsemblPlantsGene:TraesCS5A01G448200	EnsemblPlants:TraesCS5A01G448200.1	TIGR:cd02947	:	:	:

Description

No Description!

Coordinates

chr5A:+:629709717..629712942

Molecular Weight (calculated)

14539.4 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.101

Length

131 amino acids

Sequence
(BLAST)

001: MGSFLSSLWT PPPLPGDDPD SAVVAVHSKP AWDRHWEAHR NASKLMVIDF SASWCGPCRF IEPAFKEMAS RFADALFVKI DVDELAEVAK TFRVEAMPTF
101: VLVKGGQEVS RVVGAKKDEL DRKIKTFISS S

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.