Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G311300.1 | Wheat | cytosol | 94.41 | 94.41 |
| TraesCS1D01G301200.1 | Wheat | cytosol | 94.41 | 94.41 |
| HORVU1Hr1G069550.1 | Barley | cytosol | 83.22 | 90.84 |
| EES19700 | Sorghum | cytosol | 69.93 | 76.92 |
| Os05t0480200-01 | Rice | cytosol | 62.94 | 66.67 |
| Zm00001d038486_P002 | Maize | cytosol | 51.05 | 51.05 |
| TraesCS1A01G112400.1 | Wheat | cytosol | 37.76 | 41.22 |
| TraesCS1A01G325600.1 | Wheat | cytosol | 30.77 | 33.85 |
| TraesCS7A01G562100.1 | Wheat | cytosol | 24.48 | 33.02 |
| TraesCS2A01G243200.1 | Wheat | cytosol, golgi, plastid | 25.87 | 31.36 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 27.97 | 30.53 |
| TraesCS2A01G480300.1 | Wheat | cytosol | 21.68 | 22.3 |
| TraesCS3A01G418400.1 | Wheat | plastid | 23.78 | 17.99 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006662 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
| InterPro:IPR013766 | PFAM:PF00085 | PRINTS:PR00421 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF294 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | EnsemblPlantsGene:TraesCS1A01G301500 | EnsemblPlants:TraesCS1A01G301500.1 |
| TIGR:cd02947 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:495703638..495704423
Molecular Weight (calculated)
16024.8 Da
IEP (calculated)
4.284
GRAVY (calculated)
-0.369
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCGSNPVD EEEHLDYSSG NVTLITDLKS WEKKLEDATD ANKTLVVKFS AVWCGPCRIA APAYSELSLK HSDLVFVSVD VDELPELVTQ FDVRATPTFI
101: FLRDNKEIDK LVGGNQVDLQ QKFEPYCRPG DEVMSKQSFE DKT
101: FLRDNKEIDK LVGGNQVDLQ QKFEPYCRPG DEVMSKQSFE DKT
001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
Arabidopsis Description
TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.