Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G069550.1 | Barley | cytosol | 66.67 | 68.7 |
| EES19700 | Sorghum | cytosol | 65.19 | 67.69 |
| TraesCS1B01G311300.1 | Wheat | cytosol | 68.15 | 64.34 |
| TraesCS1A01G301500.1 | Wheat | cytosol | 66.67 | 62.94 |
| TraesCS1D01G301200.1 | Wheat | cytosol | 64.44 | 60.84 |
| Zm00001d038486_P002 | Maize | cytosol | 47.41 | 44.76 |
| Os05t0169000-01 | Rice | cytosol | 42.96 | 43.94 |
| Os01t0168200-01 | Rice | plasma membrane | 42.22 | 43.51 |
| Os07t0186000-02 | Rice | extracellular | 36.3 | 40.16 |
| Os03t0800700-01 | Rice | plastid | 28.89 | 29.1 |
| Os12t0280050-00 | Rice | cytosol | 25.19 | 27.64 |
| Os07t0190800-01 | Rice | cytosol | 28.15 | 27.54 |
| Os04t0629500-01 | Rice | cytosol | 24.44 | 24.81 |
| Os01t0913000-01 | Rice | plastid | 25.93 | 18.72 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | EntrezGene:4339117 | ProteinID:AAT01375.1 | EMBL:AK071198 | ProteinID:BAF17766.1 |
| ProteinID:BAS94568.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 |
| GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | EnsemblPlantsGene:Os05g0480200 | EnsemblPlants:Os05t0480200-01 |
| PFAM:PF00085 | PIRSF:PIRSF000077 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF294 | UniProt:Q75GM1 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000035ACF5 | RefSeq:XP_015639269.1 |
| RefSeq:XP_015639270.1 | : | : | : | : | : |
Description
THIOREDOXIN H-TYPE 9Thioredoxin domain 2 containing protein. (Os05t0480200-01)
Coordinates
chr5:-:23600961..23605047
Molecular Weight (calculated)
15251.9 Da
IEP (calculated)
4.126
GRAVY (calculated)
-0.361
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCGSSTVD AEEHLDYSGG NVTLVTDQKN WDNTMEEVAE HGKTVVLKFS AIWCTPCRNA APLFAELSLK YPDIVFVSVD VDEMPELVTQ YDVRATPTFI
101: FMKNNEEIDK LVGGNHEDLQ EKFEQLNRPK LYDDV
101: FMKNNEEIDK LVGGNHEDLQ EKFEQLNRPK LYDDV
001: MGSCVSKGKG DDDSVHNVEF SGGNVHLITT KESWDDKLAE ADRDGKIVVA NFSATWCGPC KIVAPFFIEL SEKHSSLMFL LVDVDELSDF SSSWDIKATP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
101: TFFFLKNGQQ IGKLVGANKP ELQKKVTSII DSVPESPQRP
Arabidopsis Description
TRX9Thioredoxin H9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Y6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.