Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G311300.1 | Wheat | cytosol | 95.8 | 95.8 |
| TraesCS1A01G301500.1 | Wheat | cytosol | 94.41 | 94.41 |
| HORVU1Hr1G069550.1 | Barley | cytosol | 81.82 | 89.31 |
| EES19700 | Sorghum | cytosol | 68.53 | 75.38 |
| Os05t0480200-01 | Rice | cytosol | 60.84 | 64.44 |
| Zm00001d038486_P002 | Maize | cytosol | 51.05 | 51.05 |
| TraesCS1D01G114000.1 | Wheat | cytosol | 37.06 | 40.46 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 28.67 | 34.45 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 24.48 | 30.97 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 27.97 | 30.53 |
| TraesCS2D01G244400.1 | Wheat | cytosol | 26.57 | 27.94 |
| TraesCS2D01G479600.1 | Wheat | cytosol | 21.68 | 22.3 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006662 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 |
| PFAM:PF00085 | PRINTS:PR00421 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF294 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | EnsemblPlantsGene:TraesCS1D01G301200 | EnsemblPlants:TraesCS1D01G301200.1 | TIGR:cd02947 |
Description
No Description!
Coordinates
chr1D:-:398976953..398977814
Molecular Weight (calculated)
16043.9 Da
IEP (calculated)
4.319
GRAVY (calculated)
-0.398
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCCGSNPVD EEEHLDYSSG NVTLITDLKS WEKKVEDATD ANKTLVVKFS AVWCGPCRIA APTYAELSLK HSDLVFVSVD VDELPELVTE FEVRATPTFI
101: FLRDKKEIDK MVGGNQADLQ QKFEPYCRPG DEVMSKQSFE DKT
101: FLRDKKEIDK MVGGNQADLQ QKFEPYCRPG DEVMSKQSFE DKT
001: MGNRCARTSC CRKLWSCICC CSNNNNNSYG QTRSQHGSKG KVHPVSRIEK WEEKITEANN HGKILVVNFS APWCVPCKKI EPVFRDLASR YPSMIFVTVD
101: VEELAEFSNE WNVEATPTVV FLKDGRQMDK LVGAETSELQ KKTAAAADLF LRKP
101: VEELAEFSNE WNVEATPTVV FLKDGRQMDK LVGAETSELQ KKTAAAADLF LRKP
Arabidopsis Description
Putative thioredoxin H10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXZ8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.