Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G505100.1 | Wheat | cytosol | 97.84 | 97.84 |
| TraesCS2A01G480300.1 | Wheat | cytosol | 97.84 | 97.84 |
| HORVU2Hr1G107990.1 | Barley | cytosol | 94.96 | 95.65 |
| Os04t0629500-01 | Rice | cytosol | 69.06 | 72.18 |
| Zm00001d026368_P001 | Maize | cytosol, extracellular | 65.47 | 70.54 |
| OQU82388 | Sorghum | cytosol | 64.75 | 69.77 |
| GSMUA_Achr5P26380_001 | Banana | cytosol | 46.04 | 49.61 |
| VIT_00s0532g00030.t01 | Wine grape | cytosol | 43.17 | 47.62 |
| AT1G11530.1 | Thale cress | cytosol | 38.85 | 45.76 |
| PGSC0003DMT400055905 | Potato | cytosol | 41.01 | 45.6 |
| VIT_19s0014g05090.t01 | Wine grape | cytosol | 41.01 | 45.24 |
| Solyc02g079960.2.1 | Tomato | cytosol | 40.29 | 44.8 |
| Bra031769.1-P | Field mustard | cytosol | 39.57 | 43.65 |
| KRH21649 | Soybean | cytosol, plastid | 38.85 | 43.2 |
| CDY34646 | Canola | cytosol | 38.85 | 42.86 |
| KRH55615 | Soybean | cytosol | 38.13 | 42.06 |
| KRH25890 | Soybean | nucleus | 38.13 | 42.06 |
| KRH10686 | Soybean | cytosol | 37.41 | 41.94 |
| KRH22228 | Soybean | cytosol | 36.69 | 41.8 |
| KRH33304 | Soybean | cytosol | 37.41 | 41.27 |
| KRH27111 | Soybean | nucleus | 35.97 | 39.68 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 25.18 | 30.97 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 25.9 | 30.25 |
| TraesCS1D01G114000.1 | Wheat | cytosol | 28.06 | 29.77 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 28.06 | 29.77 |
| TraesCS2D01G244400.1 | Wheat | cytosol | 24.46 | 25.0 |
| TraesCS1D01G301200.1 | Wheat | cytosol | 22.3 | 21.68 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003756 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006662 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:IPR013766 |
| PFAM:PF00085 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF242 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_domain | EnsemblPlantsGene:TraesCS2D01G479600 | EnsemblPlants:TraesCS2D01G479600.1 | TIGR:cd02947 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:-:580240345..580241509
Molecular Weight (calculated)
15206.2 Da
IEP (calculated)
4.648
GRAVY (calculated)
-0.050
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAEIQRPRE VGSCRVVKVD KEAAWDLFTT QAANEGRTVA AHFGASWCVT SLSMNYKFEE LAQTHPDMLF LFVDVDDVPG VSSKLGVKAM PTFFLIKGKE
101: VVKKIVGANS DELHKMVDAS DDDSLGSAVT TLPDIVIEK
101: VVKKIVGANS DELHKMVDAS DDDSLGSAVT TLPDIVIEK
001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA
101: IKKRVDGFVQ SSRVVHIA
Arabidopsis Description
CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.