CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27111	Soybean	nucleus	93.44	90.48
KRH55615	Soybean	cytosol	69.67	67.46
KRH25890	Soybean	nucleus	68.85	66.67
KRH33304	Soybean	cytosol	66.39	64.29
KRH10686	Soybean	cytosol	62.3	61.29
KRH21649	Soybean	cytosol, plastid	60.66	59.2
AT1G11530.1	Thale cress	cytosol	56.56	58.47
PGSC0003DMT400055905	Potato	cytosol	59.84	58.4
VIT_19s0014g05090.t01	Wine grape	cytosol	59.84	57.94
Solyc02g079960.2.1	Tomato	cytosol	59.02	57.6
GSMUA_Achr9P30140_001	Banana	cytosol	62.3	56.72
Bra031769.1-P	Field mustard	cytosol	56.56	54.76
CDY34646	Canola	cytosol	55.74	53.97
GSMUA_Achr5P26380_001	Banana	cytosol	50.82	48.06
OQU82388	Sorghum	cytosol	45.9	43.41
Zm00001d026368_P001	Maize	cytosol, extracellular	45.08	42.64
Os04t0629500-01	Rice	cytosol	45.9	42.11
TraesCS2A01G480300.1	Wheat	cytosol	43.44	38.13
HORVU2Hr1G107990.1	Barley	cytosol	42.62	37.68
TraesCS2B01G505100.1	Wheat	cytosol	42.62	37.41
TraesCS2D01G479600.1	Wheat	cytosol	41.8	36.69
KRH76717	Soybean	endoplasmic reticulum, nucleus	35.25	35.83
KRH51778	Soybean	endoplasmic reticulum	33.61	35.04
KRH28739	Soybean	cytosol	34.43	35.0
KRH05879	Soybean	endoplasmic reticulum	35.25	34.96
KRH15131	Soybean	cytosol, nucleus	33.61	34.45
KRH61100	Soybean	cytosol	32.79	34.19
KRH74754	Soybean	cytosol	33.61	32.54
KRG99185	Soybean	cytosol, plastid	31.97	32.23
KRH45834	Soybean	cytosol, plastid	31.97	32.23
KRH69383	Soybean	cytosol	32.79	31.5
KRH74753	Soybean	cytosol	31.97	31.45
KRH69384	Soybean	cytosol	31.97	30.47
KRH09556	Soybean	cytosol	33.61	29.93
KRH40138	Soybean	cytosol, plastid	30.33	29.6
KRH01124	Soybean	endoplasmic reticulum	31.97	29.32
KRH00477	Soybean	cytosol	31.97	28.06
KRH01123	Soybean	cytosol	27.87	27.64
KRH40137	Soybean	endoplasmic reticulum	29.51	27.48
KRH01119	Soybean	cytosol	30.33	26.43
KRH64869	Soybean	cytosol	32.79	26.14
KRH40136	Soybean	endoplasmic reticulum	32.79	25.48
KRH74748	Soybean	plastid	27.87	24.64
KRH69387	Soybean	plastid	27.05	23.91
KRH40706	Soybean	mitochondrion	31.15	22.49
KRH00940	Soybean	nucleus, plastid	31.15	21.23
KRH40285	Soybean	plastid	30.33	20.44

Protein Annotations

MapMan:10.6.1	EntrezGene:100499858	Gene3D:3.40.30.10	EMBL:ACUP02008395	EMBL:BT089857	UniProt:C6SXG3
EnsemblPlantsGene:GLYMA_13G286600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454
GO:GO:0047134	GO:GO:0055114	GO:GO:0098869	InterPro:IPR013766	EnsemblPlants:KRH22228	ProteinID:KRH22228
ProteinID:KRH22228.1	PFAM:PF00085	PIRSF:PIRSF000077	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF364
SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0001B1534A	:

Description

hypothetical protein

Coordinates

chr13:+:38716389..38718086

Molecular Weight (calculated)

14055.9 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.233

Length

122 amino acids

Sequence
(BLAST)

001: MEEKEELKKS KVIKIDSQKS WEHHISYATN QKYPIVVHFS AFWCVPSLVM NPFFQELAST YEDVLFLTLD VDEVKEIASK MEIKAMPTFL LLSGGTPVDK
101: IVGANPDEIR KRIDHFVHST RS

Best Arabidopsis Sequence Match ( AT1G11530.1 )
(BLAST)

001: MARVVKIDSA ESWNFYVSQA KNQNCPIVAH FTALWCIPSV FMNSFFEELA FNYKDALFLI VDVDEVKEVA SQLEVKAMPT FLFLKDGNAM DKLVGANPDE
101: IKKRVDGFVQ SSRVVHIA

Arabidopsis Description

CXXS1Thioredoxin-like protein CXXS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LDI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.