CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69384	Soybean	cytosol	94.35	91.41
KRH74754	Soybean	cytosol	80.65	79.37
KRH69383	Soybean	cytosol	79.84	77.95
KRH45834	Soybean	cytosol, plastid	66.13	67.77
KRG99185	Soybean	cytosol, plastid	66.13	67.77
PGSC0003DMT400045460	Potato	cytosol	35.48	64.71
VIT_01s0026g01460.t01	Wine grape	cytosol	62.9	64.46
PGSC0003DMT400045450	Potato	cytosol	64.52	59.26
Solyc05g006830.2.1	Tomato	cytosol, plastid	64.52	59.26
Solyc05g006870.2.1	Tomato	cytosol	63.71	58.52
KRH74748	Soybean	plastid	62.1	55.8
Solyc05g006860.2.1	Tomato	cytosol	60.48	55.56
KRH69387	Soybean	plastid	59.68	53.62
Solyc04g005810.2.1	Tomato	plastid	57.26	53.38
KRH01124	Soybean	endoplasmic reticulum	57.26	53.38
KRH40138	Soybean	cytosol, plastid	52.42	52.0
KRH40137	Soybean	endoplasmic reticulum	54.84	51.91
Solyc05g006850.2.1	Tomato	cytosol	55.65	51.11
KRH51778	Soybean	endoplasmic reticulum	47.58	50.43
KRH01123	Soybean	cytosol	48.39	48.78
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	46.77	46.77
KRH40136	Soybean	endoplasmic reticulum	58.87	46.5
KRH61100	Soybean	cytosol	43.55	46.15
KRH15131	Soybean	cytosol, nucleus	42.74	44.54
AT1G59730.1	Thale cress	cytosol	45.97	44.19
KRH28739	Soybean	cytosol	42.74	44.17
KRH76717	Soybean	endoplasmic reticulum, nucleus	42.74	44.17
GSMUA_Achr2P17710_001	Banana	cytosol	44.35	43.31
HORVU5Hr1G107210.1	Barley	cytosol	44.35	41.98
TraesCS5A01G448200.1	Wheat	cytosol	44.35	41.98
Os03t0800700-01	Rice	plastid	45.16	41.79
GSMUA_Achr7P16980_001	Banana	cytosol	34.68	41.75
KRH05879	Soybean	endoplasmic reticulum	41.13	41.46
CDY27290	Canola	cytosol	42.74	41.41
Os07t0190800-01	Rice	cytosol	45.97	41.3
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	43.55	41.22
TraesCS5D01G454800.1	Wheat	cytosol	43.55	41.22
CDY45144	Canola	cytosol	41.94	40.62
CDY30901	Canola	cytosol	41.94	40.62
Bra027837.1-P	Field mustard	cytosol	41.94	40.62
Bra017898.1-P	Field mustard	cytosol	41.94	40.62
Zm00001d034491_P001	Maize	plastid	43.55	40.6
EER90722	Sorghum	cytosol	43.55	40.6
KRH01119	Soybean	cytosol	44.35	39.29
AT1G69880.1	Thale cress	plastid	45.97	38.51
HORVU5Hr1G107170.1	Barley	cytosol	44.35	37.93
CDY23543	Canola	cytosol	42.74	37.86
Bra003976.1-P	Field mustard	cytosol	42.74	37.59
CDY48387	Canola	cytosol	42.74	37.59
Bra003977.1-P	Field mustard	cytosol	44.35	36.91
CDY48388	Canola	cytosol	43.55	36.73
CDY23544	Canola	cytosol	43.55	36.49
Bra016258.1-P	Field mustard	cytosol	44.35	36.42
CDY38768	Canola	cytosol, plastid	44.35	36.42
CDY11645	Canola	cytosol, plastid	44.35	36.42
KRH10686	Soybean	cytosol	36.29	36.29
KRH21649	Soybean	cytosol, plastid	34.68	34.4
KRH09556	Soybean	cytosol	37.1	33.58
KRH22228	Soybean	cytosol	31.45	31.97
GSMUA_Achr7P12220_001	Banana	cytosol	29.84	31.9
KRH00477	Soybean	cytosol	35.48	31.65
KRH33304	Soybean	cytosol	31.45	30.95
KRH27111	Soybean	nucleus	31.45	30.95
CDY03743	Canola	extracellular	20.97	30.23
KRH25890	Soybean	nucleus	30.65	30.16
KRH55615	Soybean	cytosol	30.65	30.16
KRH64869	Soybean	cytosol	36.29	29.41
HORVU6Hr1G018190.1	Barley	mitochondrion	20.16	26.88
CDY04457	Canola	cytosol	20.97	26.53
KRH40706	Soybean	mitochondrion	34.68	25.44
KRH00940	Soybean	nucleus, plastid	30.65	21.23
KRH40285	Soybean	plastid	30.65	20.99
CDY11641	Canola	plastid	20.16	12.08

Protein Annotations

MapMan:10.6.1	EntrezGene:100817095	Gene3D:3.40.30.10	EMBL:ACUP02000066	EnsemblPlantsGene:GLYMA_01G041100	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114
GO:GO:0098869	UniProt:I1J5J3	InterPro:IPR013766	EnsemblPlants:KRH74753	ProteinID:KRH74753	ProteinID:KRH74753.1
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI0002337711	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:4403613..4404643

Molecular Weight (calculated)

14055.1 Da

IEP (calculated)

8.717

GRAVY (calculated)

-0.290

Length

124 amino acids

Sequence
(BLAST)

001: MGANLSNVEN AHKSSGHLLT FHSTAKWKTH FDASKQTNKL MVIDFTATWC GPCKSMDPII QEYAAKYTNV EFIKIDVDEL MEVSQEFKVQ AMPTFILIKK
101: GKVVDKVVGA KKEELQKLIE KHLN

Best Arabidopsis Sequence Match ( AT1G59730.1 )
(BLAST)

001: MGSNVSSVHD VHSSMEITSN GFVVEIESRR QWKSLFDSMK GSNKLLVIDF TAVWCGPCKA MEPRVREIAS KYSEAVFARV DVDRLMDVAG TYRAITLPAF
101: VFVKRGEEID RVVGAKPDEL VKKIEQHRV

Arabidopsis Description

TRX7Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178WRN3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.