CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38768	Canola	cytosol, plastid	98.68	98.68
AT1G69880.1	Thale cress	plastid	82.12	83.78
CDY23544	Canola	cytosol	77.48	79.05
CDY48388	Canola	cytosol	74.83	76.87
CDY23543	Canola	cytosol	70.2	75.71
CDY48387	Canola	cytosol	70.2	75.18
CDY27290	Canola	cytosol	42.38	50.0
CDY45144	Canola	cytosol	41.72	49.22
CDY30901	Canola	cytosol	41.06	48.44
PGSC0003DMT400045460	Potato	cytosol	20.53	45.59
KRH69384	Soybean	cytosol	38.41	45.31
KRH74753	Soybean	cytosol	36.42	44.35
VIT_01s0026g01460.t01	Wine grape	cytosol	35.1	43.8
KRH74754	Soybean	cytosol	36.42	43.65
KRH69383	Soybean	cytosol	35.76	42.52
Solyc05g006830.2.1	Tomato	cytosol, plastid	37.75	42.22
Solyc05g006870.2.1	Tomato	cytosol	37.75	42.22
Solyc05g006860.2.1	Tomato	cytosol	37.09	41.48
PGSC0003DMT400045450	Potato	cytosol	37.09	41.48
CDY11641	Canola	plastid	56.29	41.06
KRG99185	Soybean	cytosol, plastid	32.45	40.5
EER90722	Sorghum	cytosol	35.1	39.85
KRH45834	Soybean	cytosol, plastid	31.79	39.67
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	33.77	38.93
TraesCS5A01G448200.1	Wheat	cytosol	33.77	38.93
HORVU5Hr1G107210.1	Barley	cytosol	33.77	38.93
TraesCS5D01G454800.1	Wheat	cytosol	33.77	38.93
Solyc05g006850.2.1	Tomato	cytosol	34.44	38.52
CDY65333	Canola	cytosol	33.77	38.35
Solyc04g005810.2.1	Tomato	plastid	33.77	38.35
Zm00001d034491_P001	Maize	plastid	33.77	38.35
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	31.13	37.9
GSMUA_Achr2P17710_001	Banana	cytosol	31.79	37.8
CDX67442	Canola	cytosol	33.11	37.31
KRH69387	Soybean	plastid	33.77	36.96
CDY43592	Canola	cytosol	29.8	36.59
CDY32970	Canola	cytosol	29.8	36.59
CDY03743	Canola	extracellular	20.53	36.05
CDX77974	Canola	cytosol	27.15	35.96
CDY53958	Canola	cytosol	27.81	35.9
Os03t0800700-01	Rice	plastid	31.79	35.82
KRH74748	Soybean	plastid	32.45	35.51
CDY39355	Canola	cytosol	27.81	35.29
HORVU5Hr1G107170.1	Barley	cytosol	33.77	35.17
CDX90669	Canola	cytosol	26.49	35.09
CDY28996	Canola	cytosol	26.49	35.09
CDY29406	Canola	cytosol	27.15	34.45
Os07t0190800-01	Rice	cytosol	31.13	34.06
CDY36029	Canola	cytosol	26.49	33.9
CDY57101	Canola	cytosol	36.42	33.33
GSMUA_Achr7P16980_001	Banana	cytosol	22.52	33.01
CDY04457	Canola	cytosol	21.19	32.65
CDY37032	Canola	cytosol	38.41	31.02
GSMUA_Achr7P12220_001	Banana	cytosol	22.52	29.31
CDY70695	Canola	cytosol	25.83	28.26
CDX72138	Canola	mitochondrion	27.81	28.19
CDY34470	Canola	cytosol	10.6	27.59
CDY27215	Canola	mitochondrion	27.15	27.52
CDY67121	Canola	mitochondrion	27.15	26.97
CDY58647	Canola	cytosol	24.5	26.43
CDX73940	Canola	cytosol	24.5	26.43
CDY35999	Canola	cytosol	24.5	26.43
CDX67647	Canola	mitochondrion	25.83	25.83
CDY32015	Canola	mitochondrion	25.83	25.83
CDY22165	Canola	cytosol	24.5	25.34
CDY34646	Canola	cytosol	19.87	23.81
HORVU6Hr1G018190.1	Barley	mitochondrion	13.91	22.58
CDY69984	Canola	plastid	27.15	22.04
CDY38116	Canola	plastid	27.15	21.93
CDY51539	Canola	plastid	25.17	21.11
CDY28704	Canola	plastid	25.17	21.11
CDY53739	Canola	plastid	25.17	20.99
CDX73752	Canola	cytosol, mitochondrion	27.15	18.64
CDY27984	Canola	nucleus	24.5	17.54
CDY00656	Canola	cytosol	24.5	9.92

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:A0A078FB87	UniProt:A0A078FB87	EnsemblPlants:CDY11645	ProteinID:CDY11645
ProteinID:CDY11645.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00049782001	InterPro:IPR013766	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF243	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EB50BE	:	:	:

Description

BnaC06g30940DBnaC06g30940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB87]

Coordinates

chrLK032012:-:722405..723209

Molecular Weight (calculated)

17551.3 Da

IEP (calculated)

9.386

GRAVY (calculated)

-0.366

Length

151 amino acids

Sequence
(BLAST)

001: MGANVSSPDQ RYSVTADLPS RRPWTPRFES QISPYKVNIP LIVEIKNKNQ WKSRLNGLKD TNKLLVIEFT AKWCGPCKSL EPKVEELAAK YTDVEFVKID
101: VDVLMSVWME YNLHTLPAIV FMKRGQEVDR VVGVKFDELE RKLHKYAQSF F

Best Arabidopsis Sequence Match ( AT1G69880.1 )
(BLAST)

001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF

Arabidopsis Description

TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.