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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32015 Canola mitochondrion 97.35 97.35
CDY67121 Canola mitochondrion 86.09 85.53
AT3G56420.2 Thale cress mitochondrion 86.09 84.42
CDY70695 Canola cytosol 76.82 84.06
CDX72138 Canola mitochondrion 80.13 81.21
CDY27215 Canola mitochondrion 78.81 79.87
Os01t0168200-01 Rice plasma membrane 40.4 46.56
Zm00001d037499_P001 Maize cytosol 40.4 45.86
GSMUA_Achr5P27870_001 Banana cytosol 42.38 45.39
PGSC0003DMT400059108 Potato cytosol 41.72 45.32
Solyc03g095500.2.1 Tomato cytosol 41.72 45.32
TraesCS1A01G112400.1 Wheat cytosol 39.07 45.04
TraesCS1B01G132600.1 Wheat cytosol 39.07 45.04
TraesCS1D01G114000.1 Wheat cytosol 39.07 45.04
EES19112 Sorghum cytosol 39.74 44.78
CDX73940 Canola cytosol 40.4 43.57
Os05t0169000-01 Rice cytosol 37.75 43.18
CDY35999 Canola cytosol 39.74 42.86
KXG31771 Sorghum cytosol 42.38 42.67
Zm00001d039710_P004 Maize cytosol 39.74 41.67
CDY58647 Canola cytosol 38.41 41.43
GSMUA_Achr8P01700_001 Banana cytosol 37.75 41.01
HORVU1Hr1G024700.4 Barley cytosol 39.07 40.41
CDY22165 Canola cytosol 38.41 39.73
CDY29406 Canola cytosol 29.8 37.82
CDY28996 Canola cytosol 28.48 37.72
CDX90669 Canola cytosol 28.48 37.72
CDX77974 Canola cytosol 28.48 37.72
CDY39355 Canola cytosol 29.14 36.97
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 39.74 36.36
CDY53958 Canola cytosol 27.81 35.9
CDY36029 Canola cytosol 27.15 34.75
CDY65333 Canola cytosol 29.14 33.08
CDY34470 Canola cytosol 12.58 32.76
CDY34646 Canola cytosol 27.15 32.54
CDY32970 Canola cytosol 26.49 32.52
CDY43592 Canola cytosol 26.49 32.52
CDX67442 Canola cytosol 28.48 32.09
CDY27290 Canola cytosol 24.5 28.91
CDY27984 Canola nucleus 39.74 28.44
CDY45144 Canola cytosol 23.84 28.12
CDY30901 Canola cytosol 23.84 28.12
CDY23544 Canola cytosol 26.49 27.03
CDY48388 Canola cytosol 25.17 25.85
CDY11645 Canola cytosol, plastid 25.83 25.83
CDY38768 Canola cytosol, plastid 25.83 25.83
CDY23543 Canola cytosol 23.84 25.71
CDY48387 Canola cytosol 23.84 25.53
CDY57101 Canola cytosol 27.15 24.85
CDY37032 Canola cytosol 27.81 22.46
CDY03743 Canola extracellular 12.58 22.09
CDY69984 Canola plastid 24.5 19.89
CDY04457 Canola cytosol 12.58 19.39
CDY38116 Canola plastid 23.84 19.25
CDX73752 Canola cytosol, mitochondrion 27.81 19.09
CDY53739 Canola plastid 21.85 18.23
CDY28704 Canola plastid 21.19 17.78
CDY51539 Canola plastid 21.19 17.78
CDY00656 Canola cytosol 39.74 16.09
CDY11641 Canola plastid 14.57 10.63
Protein Annotations
MapMan:10.6.1Gene3D:3.40.30.10GO:A0A078BTX1EnsemblPlants:CDX67647ProteinID:CDX67647ProteinID:CDX67647.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006662GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0045454EnsemblPlantsGene:GSBRNA2T00098812001
InterPro:IPR013766PFAM:PF00085PIRSF:PIRSF000077PRINTS:PR00421ScanProsite:PS00194PFscan:PS51352
PANTHER:PTHR10438PANTHER:PTHR10438:SF267SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_CS
InterPro:Thioredoxin_domainUniParc:UPI0004EEC29ESEG:seg:::
Description
BnaA07g16870D
Coordinates
chrLK031787:-:1541032..1542233
Molecular Weight (calculated)
16999.7 Da
IEP (calculated)
8.204
GRAVY (calculated)
-0.254
Length
151 amino acids
Sequence
(BLAST)
001: MGNRCARTPC CRKLWSCICC SSNKDEAQAR SQHGFKGKVH PVTKIEKWEE KITEANNNGM ILVVYFSAPW CVPCKKIEPV FKKLASIYPS MIFVTIDVEE
101: LAEFSDEWNV EATPTIVFLK DGRQMDKLVG AETSELQKKT AAAADLLLKK P
Best Arabidopsis Sequence Match ( AT3G56420.1 )
(BLAST)
001: MGNRCARTSC CRKLWSCICC CSNNNNNSYG QTRSQHGSKG KVHPVSRIEK WEEKITEANN HGKILVVNFS APWCVPCKKI EPVFRDLASR YPSMIFVTVD
101: VEELAEFSNE WNVEATPTVV FLKDGRQMDK LVGAETSELQ KKTAAAADLF LRKP
Arabidopsis Description
Putative thioredoxin H10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXZ8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.