CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30901	Canola	cytosol	92.97	92.97
CDY45144	Canola	cytosol	92.19	92.19
AT1G59730.1	Thale cress	cytosol	85.16	84.5
CDY03743	Canola	extracellular	46.09	68.6
CDY04457	Canola	cytosol	47.66	62.24
VIT_01s0026g01460.t01	Wine grape	cytosol	41.41	43.8
KRH74754	Soybean	cytosol	42.97	43.65
CDY38768	Canola	cytosol, plastid	50.78	43.05
KRH74753	Soybean	cytosol	41.41	42.74
CDY11645	Canola	cytosol, plastid	50.0	42.38
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	40.62	41.94
Solyc05g006870.2.1	Tomato	cytosol	43.75	41.48
KRH69383	Soybean	cytosol	40.62	40.94
KRH69384	Soybean	cytosol	40.62	40.62
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	41.41	40.46
HORVU5Hr1G107210.1	Barley	cytosol	41.41	40.46
TraesCS5D01G454800.1	Wheat	cytosol	41.41	40.46
TraesCS5A01G448200.1	Wheat	cytosol	41.41	40.46
Solyc05g006860.2.1	Tomato	cytosol	42.19	40.0
Solyc05g006830.2.1	Tomato	cytosol, plastid	42.19	40.0
Solyc04g005810.2.1	Tomato	plastid	41.41	39.85
PGSC0003DMT400045450	Potato	cytosol	41.41	39.26
Zm00001d034491_P001	Maize	plastid	40.62	39.1
KRG99185	Soybean	cytosol, plastid	36.72	38.84
CDY65333	Canola	cytosol	39.84	38.35
CDX67442	Canola	cytosol	39.84	38.06
KRH45834	Soybean	cytosol, plastid	35.94	38.02
CDY23543	Canola	cytosol	41.41	37.86
CDY39355	Canola	cytosol	35.16	37.82
CDY29406	Canola	cytosol	35.16	37.82
CDX77974	Canola	cytosol	33.59	37.72
Os07t0190800-01	Rice	cytosol	40.62	37.68
EER90722	Sorghum	cytosol	39.06	37.59
CDY48387	Canola	cytosol	41.41	37.59
CDY48388	Canola	cytosol	42.97	37.41
CDX90669	Canola	cytosol	32.81	36.84
CDY28996	Canola	cytosol	32.81	36.84
PGSC0003DMT400045460	Potato	cytosol	19.53	36.76
CDY43592	Canola	cytosol	35.16	36.59
CDY32970	Canola	cytosol	35.16	36.59
Os03t0800700-01	Rice	plastid	38.28	36.57
HORVU5Hr1G107170.1	Barley	cytosol	41.41	36.55
CDY23544	Canola	cytosol	42.19	36.49
Solyc05g006850.2.1	Tomato	cytosol	38.28	36.3
GSMUA_Achr2P17710_001	Banana	cytosol	35.94	36.22
GSMUA_Achr7P12220_001	Banana	cytosol	32.81	36.21
CDY53958	Canola	cytosol	32.81	35.9
CDY36029	Canola	cytosol	32.81	35.59
KRH74748	Soybean	plastid	36.72	34.06
KRH69387	Soybean	plastid	35.94	33.33
GSMUA_Achr7P16980_001	Banana	cytosol	26.56	33.01
CDY57101	Canola	cytosol	42.19	32.73
CDY34470	Canola	cytosol	14.06	31.03
CDY37032	Canola	cytosol	43.75	29.95
CDY35999	Canola	cytosol	32.03	29.29
CDX73940	Canola	cytosol	30.47	27.86
CDY34646	Canola	cytosol	27.34	27.78
CDY58647	Canola	cytosol	29.69	27.14
HORVU6Hr1G018190.1	Barley	mitochondrion	19.53	26.88
CDX72138	Canola	mitochondrion	31.25	26.85
CDY27215	Canola	mitochondrion	31.25	26.85
CDY70695	Canola	cytosol	28.91	26.81
CDY22165	Canola	cytosol	30.47	26.71
CDY67121	Canola	mitochondrion	31.25	26.32
CDY32015	Canola	mitochondrion	29.69	25.17
CDX67647	Canola	mitochondrion	28.91	24.5
CDY69984	Canola	plastid	32.81	22.58
CDY38116	Canola	plastid	32.81	22.46
CDY53739	Canola	plastid	28.12	19.89
CDX73752	Canola	cytosol, mitochondrion	33.59	19.55
CDY51539	Canola	plastid	27.34	19.44
CDY28704	Canola	plastid	27.34	19.44
CDY27984	Canola	nucleus	32.03	19.43
CDY11641	Canola	plastid	28.91	17.87
CDY00656	Canola	cytosol	30.47	10.46

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:A0A078GL20	UniProt:A0A078GL20	EnsemblPlants:CDY27290	ProteinID:CDY27290
ProteinID:CDY27290.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00037190001	InterPro:IPR013766	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EE144C	:	:	:

Description

BnaC04g18700DThioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078GL20]

Coordinates

chrLK032202:+:269349..269947

Molecular Weight (calculated)

14415.5 Da

IEP (calculated)

9.179

GRAVY (calculated)

-0.196

Length

128 amino acids

Sequence
(BLAST)

001: MGSNVSSVHD VPSSVENKNG LVVEIESRRQ WRSVFDSMKV SNKLLVIDFT AAWCGPCKAM EPRVKEIVSR YPEAVFARVD VDKLMDVAGT YRANTLPAFV
101: FMKRGEEIDR VVGAKPGELV YKIEKHRV

Best Arabidopsis Sequence Match ( AT1G59730.1 )
(BLAST)

001: MGSNVSSVHD VHSSMEITSN GFVVEIESRR QWKSLFDSMK GSNKLLVIDF TAVWCGPCKA MEPRVREIAS KYSEAVFARV DVDRLMDVAG TYRAITLPAF
101: VFVKRGEEID RVVGAKPDEL VKKIEQHRV

Arabidopsis Description

TRX7Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178WRN3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.