Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- cytosol 2
- nucleus 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH69387 | Soybean | plastid | 93.48 | 93.48 |
KRG99185 | Soybean | cytosol, plastid | 61.59 | 70.25 |
KRH45834 | Soybean | cytosol, plastid | 61.59 | 70.25 |
KRH69383 | Soybean | cytosol | 58.7 | 63.78 |
KRH74754 | Soybean | cytosol | 57.97 | 63.49 |
KRH69384 | Soybean | cytosol | 58.7 | 63.28 |
KRH74753 | Soybean | cytosol | 55.8 | 62.1 |
VIT_01s0026g01460.t01 | Wine grape | cytosol | 47.83 | 54.55 |
PGSC0003DMT400045460 | Potato | cytosol | 24.64 | 50.0 |
Solyc05g006830.2.1 | Tomato | cytosol, plastid | 44.93 | 45.93 |
PGSC0003DMT400045450 | Potato | cytosol | 44.93 | 45.93 |
Solyc05g006860.2.1 | Tomato | cytosol | 44.93 | 45.93 |
Solyc05g006870.2.1 | Tomato | cytosol | 44.93 | 45.93 |
KRH01124 | Soybean | endoplasmic reticulum | 44.2 | 45.86 |
KRH40138 | Soybean | cytosol, plastid | 39.86 | 44.0 |
Solyc04g005810.2.1 | Tomato | plastid | 42.03 | 43.61 |
KRH40137 | Soybean | endoplasmic reticulum | 40.58 | 42.75 |
KRH51778 | Soybean | endoplasmic reticulum | 36.23 | 42.73 |
KRH76717 | Soybean | endoplasmic reticulum, nucleus | 36.96 | 42.5 |
KRH01123 | Soybean | cytosol | 36.96 | 41.46 |
KRH28739 | Soybean | cytosol | 35.51 | 40.83 |
Solyc05g006850.2.1 | Tomato | cytosol | 39.86 | 40.74 |
KRH15131 | Soybean | cytosol, nucleus | 34.78 | 40.34 |
GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 36.23 | 40.32 |
KRH40136 | Soybean | endoplasmic reticulum | 45.65 | 40.13 |
HORVU5Hr1G107210.1 | Barley | cytosol | 36.96 | 38.93 |
TraesCS5A01G448200.1 | Wheat | cytosol | 36.96 | 38.93 |
Os03t0800700-01 | Rice | plastid | 37.68 | 38.81 |
GSMUA_Achr2P17710_001 | Banana | cytosol | 35.51 | 38.58 |
KRH61100 | Soybean | cytosol | 32.61 | 38.46 |
Os07t0190800-01 | Rice | cytosol | 38.41 | 38.41 |
EER90722 | Sorghum | cytosol | 36.96 | 38.35 |
TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 36.23 | 38.17 |
TraesCS5D01G454800.1 | Wheat | cytosol | 36.23 | 38.17 |
AT1G59730.1 | Thale cress | cytosol | 35.51 | 37.98 |
Zm00001d034491_P001 | Maize | plastid | 36.23 | 37.59 |
CDY45144 | Canola | cytosol | 34.06 | 36.72 |
Bra027837.1-P | Field mustard | cytosol | 34.06 | 36.72 |
CDY30901 | Canola | cytosol | 34.06 | 36.72 |
CDY27290 | Canola | cytosol | 34.06 | 36.72 |
Bra017898.1-P | Field mustard | cytosol | 33.33 | 35.94 |
GSMUA_Achr7P16980_001 | Banana | cytosol | 26.81 | 35.92 |
HORVU5Hr1G107170.1 | Barley | cytosol | 36.96 | 35.17 |
KRH05879 | Soybean | endoplasmic reticulum | 31.16 | 34.96 |
KRH01119 | Soybean | cytosol | 34.78 | 34.29 |
AT1G69880.1 | Thale cress | plastid | 35.51 | 33.11 |
KRH10686 | Soybean | cytosol | 29.71 | 33.06 |
CDY23543 | Canola | cytosol | 33.33 | 32.86 |
Bra003976.1-P | Field mustard | cytosol | 33.33 | 32.62 |
CDY48387 | Canola | cytosol | 33.33 | 32.62 |
CDY11645 | Canola | cytosol, plastid | 35.51 | 32.45 |
CDY38768 | Canola | cytosol, plastid | 35.51 | 32.45 |
Bra016258.1-P | Field mustard | cytosol | 35.51 | 32.45 |
KRH21649 | Soybean | cytosol, plastid | 28.99 | 32.0 |
CDY23544 | Canola | cytosol | 34.06 | 31.76 |
Bra003977.1-P | Field mustard | cytosol | 32.61 | 30.2 |
CDY48388 | Canola | cytosol | 31.88 | 29.93 |
CDY03743 | Canola | extracellular | 18.12 | 29.07 |
KRH22228 | Soybean | cytosol | 24.64 | 27.87 |
KRH27111 | Soybean | nucleus | 24.64 | 26.98 |
KRH25890 | Soybean | nucleus | 24.64 | 26.98 |
HORVU6Hr1G018190.1 | Barley | mitochondrion | 18.12 | 26.88 |
KRH09556 | Soybean | cytosol | 26.09 | 26.28 |
KRH55615 | Soybean | cytosol | 23.91 | 26.19 |
KRH33304 | Soybean | cytosol | 23.91 | 26.19 |
KRH00477 | Soybean | cytosol | 26.09 | 25.9 |
GSMUA_Achr7P12220_001 | Banana | cytosol | 21.74 | 25.86 |
CDY04457 | Canola | cytosol | 17.39 | 24.49 |
KRH64869 | Soybean | cytosol | 26.09 | 23.53 |
KRH40706 | Soybean | mitochondrion | 26.81 | 21.89 |
KRH00940 | Soybean | nucleus, plastid | 27.54 | 21.23 |
KRH40285 | Soybean | plastid | 27.54 | 20.99 |
CDY11641 | Canola | plastid | 19.57 | 13.04 |
Protein Annotations
MapMan:10.6.1 | EntrezGene:100527298 | Gene3D:3.40.30.10 | EMBL:ACUP02000066 | EMBL:BT092129 | UniProt:C6T3W8 |
EnsemblPlantsGene:GLYMA_01G040700 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 |
GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 | GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 |
GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 | InterPro:IPR013766 | EnsemblPlants:KRH74748 | ProteinID:KRH74748 |
ProteinID:KRH74748.1 | PFAM:PF00085 | PIRSF:PIRSF000077 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 |
PANTHER:PTHR10438:SF278 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain |
UniParc:UPI0001B15637 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:4392159..4393458
Molecular Weight (calculated)
15820.9 Da
IEP (calculated)
9.618
GRAVY (calculated)
-0.446
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTIYNFSY SKRFSESFNS SKSKRESSSS NILAFHSTAQ WNAHYKATKE TNKLMVLDFT ATWCGPCKLM DPVIQEFAGN YTDVDFIKID VEELTEVSQA
101: LQVYQLPTFI LVKKGKVADR VVGVKKEELK RSIEKHRK
101: LQVYQLPTFI LVKKGKVADR VVGVKKEELK RSIEKHRK
001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF
Arabidopsis Description
TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.