CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003977.1-P	Field mustard	cytosol	99.32	97.99
CDY23544	Canola	cytosol	96.6	95.95
CDY23543	Canola	cytosol	74.83	78.57
CDY48387	Canola	cytosol	74.83	78.01
CDY38768	Canola	cytosol, plastid	76.87	74.83
CDY11645	Canola	cytosol, plastid	76.87	74.83
AT1G69880.1	Thale cress	plastid	70.75	70.27
KRH69384	Soybean	cytosol	38.78	44.53
CDY45144	Canola	cytosol	38.1	43.75
KRH74753	Soybean	cytosol	36.73	43.55
CDY30901	Canola	cytosol	37.41	42.97
CDY27290	Canola	cytosol	37.41	42.97
PGSC0003DMT400045460	Potato	cytosol	19.73	42.65
VIT_01s0026g01460.t01	Wine grape	cytosol	34.69	42.15
KRH74754	Soybean	cytosol	36.05	42.06
KRH69383	Soybean	cytosol	35.37	40.94
Solyc05g006870.2.1	Tomato	cytosol	36.73	40.0
Solyc05g006830.2.1	Tomato	cytosol, plastid	36.73	40.0
CDY53958	Canola	cytosol	31.29	39.32
PGSC0003DMT400045450	Potato	cytosol	36.05	39.26
Solyc05g006860.2.1	Tomato	cytosol	35.37	38.52
HORVU5Hr1G107210.1	Barley	cytosol	33.33	37.4
TraesCS5A01G448200.1	Wheat	cytosol	33.33	37.4
CDY36029	Canola	cytosol	29.93	37.29
CDY65333	Canola	cytosol	33.33	36.84
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	32.65	36.64
TraesCS5D01G454800.1	Wheat	cytosol	32.65	36.64
CDY32970	Canola	cytosol	30.61	36.59
Solyc04g005810.2.1	Tomato	plastid	32.65	36.09
CDX67442	Canola	cytosol	32.65	35.82
CDY43592	Canola	cytosol	29.93	35.77
Solyc05g006850.2.1	Tomato	cytosol	32.65	35.56
KRG99185	Soybean	cytosol, plastid	29.25	35.54
EER90722	Sorghum	cytosol	31.97	35.34
CDX77974	Canola	cytosol	27.21	35.09
KRH45834	Soybean	cytosol, plastid	28.57	34.71
CDX90669	Canola	cytosol	26.53	34.21
CDY28996	Canola	cytosol	26.53	34.21
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	28.57	33.87
Zm00001d034491_P001	Maize	plastid	30.61	33.83
HORVU5Hr1G107170.1	Barley	cytosol	33.33	33.79
Os03t0800700-01	Rice	plastid	30.61	33.58
KRH69387	Soybean	plastid	31.29	33.33
Os07t0190800-01	Rice	cytosol	31.29	33.33
GSMUA_Achr2P17710_001	Banana	cytosol	28.57	33.07
CDY39355	Canola	cytosol	26.53	32.77
CDY29406	Canola	cytosol	25.85	31.93
KRH74748	Soybean	plastid	29.93	31.88
CDY11641	Canola	plastid	44.22	31.4
GSMUA_Achr7P16980_001	Banana	cytosol	21.77	31.07
CDY57101	Canola	cytosol	34.69	30.91
CDY03743	Canola	extracellular	17.69	30.23
GSMUA_Achr7P12220_001	Banana	cytosol	23.13	29.31
CDY37032	Canola	cytosol	36.73	28.88
CDY27215	Canola	mitochondrion	29.25	28.86
CDX72138	Canola	mitochondrion	28.57	28.19
CDY04457	Canola	cytosol	18.37	27.55
CDY70695	Canola	cytosol	25.17	26.81
CDY34646	Canola	cytosol	22.45	26.19
CDY67121	Canola	mitochondrion	26.53	25.66
CDX67647	Canola	mitochondrion	25.85	25.17
CDY32015	Canola	mitochondrion	25.85	25.17
CDY58647	Canola	cytosol	23.13	24.29
CDY34470	Canola	cytosol	9.52	24.14
CDX73940	Canola	cytosol	22.45	23.57
CDY22165	Canola	cytosol	23.13	23.29
CDY35999	Canola	cytosol	21.77	22.86
CDY69984	Canola	plastid	26.53	20.97
CDY38116	Canola	plastid	26.53	20.86
HORVU6Hr1G018190.1	Barley	mitochondrion	12.93	20.43
CDY53739	Canola	plastid	23.81	19.34
CDY28704	Canola	plastid	23.13	18.89
CDY51539	Canola	plastid	23.13	18.89
CDX73752	Canola	cytosol, mitochondrion	27.21	18.18
CDY27984	Canola	nucleus	21.77	15.17
CDY00656	Canola	cytosol	22.45	8.85

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:A0A078IGX2	UniProt:A0A078IGX2	EnsemblPlants:CDY48388	ProteinID:CDY48388
ProteinID:CDY48388.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00089395001	InterPro:IPR013766	PFAM:PF00085	PRINTS:PR00421	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EEACB3	:	:	:

Description

BnaA07g24070DBnaA07g24070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGX2]

Coordinates

chrLK032770:-:60930..61764

Molecular Weight (calculated)

16941.5 Da

IEP (calculated)

9.547

GRAVY (calculated)

-0.453

Length

147 amino acids

Sequence
(BLAST)

001: MGASTSSPTQ RFSLNNLRSR KPHTPGVEEY EISPYKVSPL IVEMKKKNQW KSRFNALKDT DKLLVIEFTA KWCGPCKSLE AKLEELAAKY TNVEFIDVDV
101: LKSVWKEYNL HALPTVVFMK RGQEVDRVVG LKLDEIEGKL HKYAYSF

Best Arabidopsis Sequence Match ( AT1G69880.1 )
(BLAST)

001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF

Arabidopsis Description

TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.