CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003976.1-P	Field mustard	cytosol	97.86	97.16
CDY48387	Canola	cytosol	97.86	97.16
CDY23544	Canola	cytosol	80.71	76.35
CDY48388	Canola	cytosol	78.57	74.83
CDY38768	Canola	cytosol, plastid	75.71	70.2
CDY11645	Canola	cytosol, plastid	75.71	70.2
AT1G69880.1	Thale cress	plastid	72.14	68.24
PGSC0003DMT400045460	Potato	cytosol	21.43	44.12
CDY45144	Canola	cytosol	39.29	42.97
KRH74753	Soybean	cytosol	37.86	42.74
PGSC0003DMT400045450	Potato	cytosol	40.71	42.22
CDY30901	Canola	cytosol	38.57	42.19
KRH69384	Soybean	cytosol	38.57	42.19
VIT_01s0026g01460.t01	Wine grape	cytosol	36.43	42.15
Solyc05g006830.2.1	Tomato	cytosol, plastid	40.0	41.48
Solyc05g006870.2.1	Tomato	cytosol	40.0	41.48
CDY27290	Canola	cytosol	37.86	41.41
KRH74754	Soybean	cytosol	37.14	41.27
Solyc05g006860.2.1	Tomato	cytosol	39.29	40.74
KRH69383	Soybean	cytosol	36.43	40.16
CDY53958	Canola	cytosol	32.86	39.32
CDY36029	Canola	cytosol	32.14	38.14
CDY65333	Canola	cytosol	35.71	37.59
HORVU5Hr1G107210.1	Barley	cytosol	35.0	37.4
TraesCS5A01G448200.1	Wheat	cytosol	35.0	37.4
CDY32970	Canola	cytosol	32.86	37.4
KRG99185	Soybean	cytosol, plastid	32.14	37.19
Solyc05g006850.2.1	Tomato	cytosol	35.71	37.04
Solyc04g005810.2.1	Tomato	plastid	35.0	36.84
CDX77974	Canola	cytosol	30.0	36.84
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	34.29	36.64
TraesCS5D01G454800.1	Wheat	cytosol	34.29	36.64
CDY43592	Canola	cytosol	32.14	36.59
KRH45834	Soybean	cytosol, plastid	31.43	36.36
GSMUA_Achr2P17710_001	Banana	cytosol	32.86	36.22
EER90722	Sorghum	cytosol	34.29	36.09
CDY28996	Canola	cytosol	29.29	35.96
CDX90669	Canola	cytosol	29.29	35.96
Os03t0800700-01	Rice	plastid	34.29	35.82
CDX67442	Canola	cytosol	34.29	35.82
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	30.71	34.68
Zm00001d034491_P001	Maize	plastid	32.86	34.59
CDY39355	Canola	cytosol	29.29	34.45
HORVU5Hr1G107170.1	Barley	cytosol	35.0	33.79
CDY29406	Canola	cytosol	28.57	33.61
KRH74748	Soybean	plastid	32.86	33.33
CDY34470	Canola	cytosol	13.57	32.76
KRH69387	Soybean	plastid	31.43	31.88
CDY57101	Canola	cytosol	37.14	31.52
CDY03743	Canola	extracellular	19.29	31.4
Os07t0190800-01	Rice	cytosol	30.71	31.16
GSMUA_Achr7P16980_001	Banana	cytosol	22.86	31.07
CDY37032	Canola	cytosol	37.86	28.34
CDY11641	Canola	plastid	41.43	28.02
CDY34646	Canola	cytosol	24.29	26.98
CDY04457	Canola	cytosol	18.57	26.53
GSMUA_Achr7P12220_001	Banana	cytosol	21.43	25.86
CDY27215	Canola	mitochondrion	27.14	25.5
CDX72138	Canola	mitochondrion	26.43	24.83
CDY70695	Canola	cytosol	24.29	24.64
CDX67647	Canola	mitochondrion	25.71	23.84
CDY32015	Canola	mitochondrion	25.71	23.84
CDY67121	Canola	mitochondrion	25.71	23.68
CDX73940	Canola	cytosol	22.14	22.14
CDY58647	Canola	cytosol	22.14	22.14
CDY35999	Canola	cytosol	21.43	21.43
CDY22165	Canola	cytosol	22.14	21.23
HORVU6Hr1G018190.1	Barley	mitochondrion	13.57	20.43
CDY69984	Canola	plastid	25.71	19.35
CDY53739	Canola	plastid	25.0	19.34
CDY38116	Canola	plastid	25.71	19.25
CDX73752	Canola	cytosol, mitochondrion	30.0	19.09
CDY28704	Canola	plastid	24.29	18.89
CDY51539	Canola	plastid	24.29	18.89
CDY27984	Canola	nucleus	21.43	14.22
CDY00656	Canola	cytosol	22.14	8.31

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	GO:A0A078GG39	UniProt:A0A078GG39	EnsemblPlants:CDY23543	ProteinID:CDY23543
ProteinID:CDY23543.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00022192001	InterPro:IPR013766	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194
PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF243	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI0004EBB087	:	:	:

Description

BnaC06g25120DThioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078GG39]

Coordinates

chrLK032144:-:502796..503512

Molecular Weight (calculated)

16363.9 Da

IEP (calculated)

9.317

GRAVY (calculated)

-0.355

Length

140 amino acids

Sequence
(BLAST)

001: MGANTSSPKD RLSLSDLRAR KSQTPYKVSP FIVEMKKENQ WKFQLNALKD TNKLLVIEFT AKWCGPCKFL EPKLEDLAAK YTDVEFVKID VDVIMSVWKE
101: YNLYTFPAVI FMKRGQEVDR VVGLKLDEIE QKLHKYAYSF

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.