CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74753	Soybean	cytosol	91.41	94.35
KRH74754	Soybean	cytosol	79.69	80.95
KRH69383	Soybean	cytosol	79.69	80.31
KRH45834	Soybean	cytosol, plastid	63.28	66.94
KRG99185	Soybean	cytosol, plastid	63.28	66.94
VIT_01s0026g01460.t01	Wine grape	cytosol	61.72	65.29
PGSC0003DMT400045460	Potato	cytosol	33.59	63.24
KRH74748	Soybean	plastid	63.28	58.7
Solyc05g006830.2.1	Tomato	cytosol, plastid	61.72	58.52
PGSC0003DMT400045450	Potato	cytosol	61.72	58.52
Solyc05g006870.2.1	Tomato	cytosol	60.94	57.78
KRH69387	Soybean	plastid	61.72	57.25
Solyc05g006860.2.1	Tomato	cytosol	57.81	54.81
KRH01124	Soybean	endoplasmic reticulum	56.25	54.14
KRH40137	Soybean	endoplasmic reticulum	53.91	52.67
Solyc04g005810.2.1	Tomato	plastid	53.91	51.88
KRH40138	Soybean	cytosol, plastid	50.0	51.2
Solyc05g006850.2.1	Tomato	cytosol	53.91	51.11
KRH51778	Soybean	endoplasmic reticulum	46.09	50.43
KRH01123	Soybean	cytosol	47.66	49.59
KRH40136	Soybean	endoplasmic reticulum	58.59	47.77
KRH61100	Soybean	cytosol	42.19	46.15
KRH76717	Soybean	endoplasmic reticulum, nucleus	42.97	45.83
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	43.75	45.16
KRH28739	Soybean	cytosol	41.41	44.17
KRH15131	Soybean	cytosol, nucleus	40.62	43.7
AT1G59730.1	Thale cress	cytosol	43.75	43.41
HORVU5Hr1G107210.1	Barley	cytosol	42.19	41.22
TraesCS5A01G448200.1	Wheat	cytosol	42.19	41.22
Os03t0800700-01	Rice	plastid	42.97	41.04
KRH01119	Soybean	cytosol	44.53	40.71
KRH05879	Soybean	endoplasmic reticulum	39.06	40.65
CDY27290	Canola	cytosol	40.62	40.62
Os07t0190800-01	Rice	cytosol	43.75	40.58
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	41.41	40.46
TraesCS5D01G454800.1	Wheat	cytosol	41.41	40.46
GSMUA_Achr2P17710_001	Banana	cytosol	39.84	40.16
AT1G69880.1	Thale cress	plastid	46.09	39.86
Bra017898.1-P	Field mustard	cytosol	39.84	39.84
Bra027837.1-P	Field mustard	cytosol	39.84	39.84
CDY30901	Canola	cytosol	39.84	39.84
CDY45144	Canola	cytosol	39.84	39.84
EER90722	Sorghum	cytosol	40.62	39.1
Zm00001d034491_P001	Maize	plastid	40.62	39.1
Bra003977.1-P	Field mustard	cytosol	45.31	38.93
CDY48388	Canola	cytosol	44.53	38.78
CDY23543	Canola	cytosol	42.19	38.57
CDY11645	Canola	cytosol, plastid	45.31	38.41
Bra016258.1-P	Field mustard	cytosol	45.31	38.41
CDY38768	Canola	cytosol, plastid	45.31	38.41
Bra003976.1-P	Field mustard	cytosol	42.19	38.3
CDY48387	Canola	cytosol	42.19	38.3
GSMUA_Achr7P16980_001	Banana	cytosol	30.47	37.86
CDY23544	Canola	cytosol	43.75	37.84
HORVU5Hr1G107170.1	Barley	cytosol	42.19	37.24
KRH10686	Soybean	cytosol	34.38	35.48
KRH21649	Soybean	cytosol, plastid	32.81	33.6
KRH09556	Soybean	cytosol	35.94	33.58
KRH22228	Soybean	cytosol	30.47	31.97
GSMUA_Achr7P12220_001	Banana	cytosol	28.91	31.9
KRH00477	Soybean	cytosol	34.38	31.65
KRH27111	Soybean	nucleus	30.47	30.95
CDY03743	Canola	extracellular	20.31	30.23
KRH25890	Soybean	nucleus	29.69	30.16
KRH33304	Soybean	cytosol	29.69	30.16
KRH55615	Soybean	cytosol	29.69	30.16
KRH64869	Soybean	cytosol	35.16	29.41
HORVU6Hr1G018190.1	Barley	mitochondrion	20.31	27.96
CDY04457	Canola	cytosol	20.31	26.53
KRH40706	Soybean	mitochondrion	33.59	25.44
KRH00940	Soybean	nucleus, plastid	28.91	20.67
KRH40285	Soybean	plastid	28.91	20.44
CDY11641	Canola	plastid	22.66	14.01

Protein Annotations

MapMan:10.6.1	EntrezGene:100820138	Gene3D:3.40.30.10	EMBL:ACUP02000704	EnsemblPlantsGene:GLYMA_02G023100	GO:GO:0003674
GO:GO:0003824	GO:GO:0004791	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006662	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015035
GO:GO:0016671	GO:GO:0019725	GO:GO:0034599	GO:GO:0045454	GO:GO:0047134	GO:GO:0055114
GO:GO:0098869	UniProt:I1JBS5	InterPro:IPR013766	EnsemblPlants:KRH69384	ProteinID:KRH69384	ProteinID:KRH69384.1
PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	TIGRFAMs:TIGR01068	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000233745C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:2104620..2105638

Molecular Weight (calculated)

14472.5 Da

IEP (calculated)

8.251

GRAVY (calculated)

-0.338

Length

128 amino acids

Sequence
(BLAST)

001: MGANLSNMEN AHKSSKSSSD HILTFHSTAK WKTHFDASKE TNKLMVIDFT ATWCGPCKSM DPIIQEYAAK YTNVEFIKID VDELMGVSQE FQVHAMPTFI
101: LIKKGKVVDK VVGAKKEELQ KLIEKHLN

Best Arabidopsis Sequence Match ( AT5G39950.1 )
(BLAST)

001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA

Arabidopsis Description

TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.