Factsheet for Bra003976.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48387	Canola	cytosol	100.0	100.0
CDY23543	Canola	cytosol	97.16	97.86
Bra003977.1-P	Field mustard	cytosol	79.43	75.17
Bra016258.1-P	Field mustard	cytosol	73.76	68.87
AT1G69880.1	Thale cress	plastid	71.63	68.24
PGSC0003DMT400045460	Potato	cytosol	21.28	44.12
Bra027837.1-P	Field mustard	cytosol	39.01	42.97
KRH74753	Soybean	cytosol	37.59	42.74
PGSC0003DMT400045450	Potato	cytosol	40.43	42.22
KRH69384	Soybean	cytosol	38.3	42.19
VIT_01s0026g01460.t01	Wine grape	cytosol	36.17	42.15
Solyc05g006830.2.1	Tomato	cytosol, plastid	39.72	41.48
Solyc05g006870.2.1	Tomato	cytosol	39.72	41.48
KRH74754	Soybean	cytosol	36.88	41.27
Bra040318.1-P	Field mustard	cytosol	37.59	40.77
Solyc05g006860.2.1	Tomato	cytosol	39.01	40.74
Bra017898.1-P	Field mustard	cytosol	36.88	40.62
Bra036335.1-P	Field mustard	cytosol	33.33	40.17
KRH69383	Soybean	cytosol	36.17	40.16
Bra014037.1-P	Field mustard	cytosol	31.91	38.14
TraesCS5A01G448200.1	Wheat	cytosol	34.75	37.4
HORVU5Hr1G107210.1	Barley	cytosol	34.75	37.4
Bra027469.1-P	Field mustard	cytosol	32.62	37.4
KRG99185	Soybean	cytosol, plastid	31.91	37.19
Solyc05g006850.2.1	Tomato	cytosol	35.46	37.04
Bra036839.1-P	Field mustard	cytosol	29.79	36.84
Solyc04g005810.2.1	Tomato	plastid	34.75	36.84
TraesCS5D01G454800.1	Wheat	cytosol	34.04	36.64
TraesCS5B01G452700.1	Wheat	cytosol, golgi, unclear	34.04	36.64
KRH45834	Soybean	cytosol, plastid	31.21	36.36
GSMUA_Achr2P17710_001	Banana	cytosol	32.62	36.22
EER90722	Sorghum	cytosol	34.04	36.09
Bra028445.1-P	Field mustard	cytosol	34.04	36.09
Bra012872.1-P	Field mustard	cytosol	29.08	35.96
Os03t0800700-01	Rice	plastid	34.04	35.82
GSMUA_Achr9P10960_001	Banana	mitochondrion, plastid	30.5	34.68
Zm00001d034491_P001	Maize	plastid	32.62	34.59
HORVU5Hr1G107170.1	Barley	cytosol	34.75	33.79
Bra025762.1-P	Field mustard	cytosol	28.37	33.61
KRH74748	Soybean	plastid	32.62	33.33
KRH69387	Soybean	plastid	31.21	31.88
Os07t0190800-01	Rice	cytosol	30.5	31.16
GSMUA_Achr7P16980_001	Banana	cytosol	22.7	31.07
Bra031769.1-P	Field mustard	cytosol	25.53	28.57
GSMUA_Achr7P12220_001	Banana	cytosol	21.28	25.86
Bra007245.1-P	Field mustard	plastid	25.53	25.71
Bra014691.1-P	Field mustard	cytosol, mitochondrion	23.4	24.63
Bra040055.1-P	Field mustard	cytosol	19.86	20.44
HORVU6Hr1G018190.1	Barley	mitochondrion	13.48	20.43
Bra021417.1-P	Field mustard	plastid	24.82	19.23
Bra001346.1-P	Field mustard	cytosol	21.99	18.9
Bra040596.1-P	Field mustard	plastid	24.11	18.78
Bra023564.1-P	Field mustard	plastid	23.4	17.65

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra003976	EnsemblPlants:Bra003976.1	EnsemblPlants:Bra003976.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4CIE3	PFAM:PF00085	PIRSF:PIRSF000077	ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438
PANTHER:PTHR10438:SF278	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain
UniParc:UPI0002541965	:	:	:	:	:

Description

AT1G69880 (E=2e-053) ATH8 | ATH8 (thioredoxin H-type 8)

Coordinates

chrA07:-:16072821..16073540

Molecular Weight (calculated)

16460.1 Da

IEP (calculated)

9.387

GRAVY (calculated)

-0.357

Length

141 amino acids

Sequence
(BLAST)

001: MGANTSSPKE RLSLSDLRAR KSRTPNCKVS PFIVEMKKEN QWKFQLNALK DTNKLLVIEF TAKWCGPCKF LEPKLEDLAA KYTDVEFVKI DVDVIMSVWK
101: EYNLYTFPAV IFMKRGQEVD RVVGLKLDEI EQKLHKYAYS F

Best Arabidopsis Sequence Match ( AT1G69880.1 )
(BLAST)

001: MGANVSTPDQ RFQVTHFRST KPWTPRPEIY PFKVNSPCIV EIKNMNQWKS RLNALKDTNK LLVIEFTAKW CGPCKTLEPK LEELAAKYTD VEFVKIDVDV
101: LMSVWMEFNL STLPAIVFMK RGREVDMVVG VKVDELERKL NKYTQSFF

Arabidopsis Description

TRX8Thioredoxin H8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAS1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.