Factsheet for Bra025762.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29406	Canola	cytosol	100.0	100.0
AT1G19730.1	Thale cress	cytosol	85.71	85.71
Bra036335.1-P	Field mustard	cytosol	64.71	65.81
Bra014037.1-P	Field mustard	cytosol	61.34	61.86
Bra036839.1-P	Field mustard	cytosol	57.14	59.65
Bra012872.1-P	Field mustard	cytosol	57.14	59.65
Bra027469.1-P	Field mustard	cytosol	60.5	58.54
HORVU1Hr1G075560.1	Barley	cytosol	57.14	55.74
TraesCS1D01G327500.1	Wheat	cytosol, plastid	53.78	53.78
TraesCS1B01G339000.1	Wheat	cytosol	52.1	52.54
TraesCS1B01G338800.1	Wheat	cytosol, golgi, plastid, unclear	55.46	51.97
TraesCS1A01G325600.1	Wheat	cytosol	56.3	51.54
OQU78269	Sorghum	cytosol	52.94	50.0
Zm00001d038652_P003	Maize	cytosol	51.26	47.66
TraesCS7A01G562100.1	Wheat	cytosol	40.34	45.28
TraesCS7D01G001000.1	Wheat	cytosol	41.18	43.36
Bra040318.1-P	Field mustard	cytosol	42.02	38.46
Bra028445.1-P	Field mustard	cytosol	42.86	38.35
Bra017898.1-P	Field mustard	cytosol	38.66	35.94
Bra027837.1-P	Field mustard	cytosol	36.97	34.38
Bra031769.1-P	Field mustard	cytosol	36.13	34.13
Bra014691.1-P	Field mustard	cytosol, mitochondrion	36.97	32.84
Bra007245.1-P	Field mustard	plastid	37.82	32.14
Bra003976.1-P	Field mustard	cytosol	33.61	28.37
Bra016258.1-P	Field mustard	cytosol	34.45	27.15
Bra040055.1-P	Field mustard	cytosol	31.09	27.01
Bra003977.1-P	Field mustard	cytosol	32.77	26.17
Bra001346.1-P	Field mustard	cytosol	32.77	23.78
Bra021417.1-P	Field mustard	plastid	33.61	21.98
Bra040596.1-P	Field mustard	plastid	31.09	20.44
Bra023564.1-P	Field mustard	plastid	31.93	20.32

Protein Annotations

MapMan:10.6.1	MapMan:18.7.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra025762	EnsemblPlants:Bra025762.1	EnsemblPlants:Bra025762.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015035	GO:GO:0016671	GO:GO:0019725	GO:GO:0045454
GO:GO:0055114	InterPro:IPR013766	UniProt:M4EAF4	PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421
ScanProsite:PS00194	PFscan:PS51352	PANTHER:PTHR10438	PANTHER:PTHR10438:SF293	SUPFAM:SSF52833	TIGRFAMs:TIGR01068
InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS	InterPro:Thioredoxin_domain	UniParc:UPI000253EE8C	:

Description

AT1G19730 (E=6e-055) ATTRX4, ATH4 | ATTRX4; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor

Coordinates

chrA06:-:7753056..7753780

Molecular Weight (calculated)

12983.7 Da

IEP (calculated)

4.839

GRAVY (calculated)

0.240

Length

119 amino acids

Sequence
(BLAST)

001: MAAEEGQVIG CHEIDVWAVQ LDTAKQSNKL IVIDFTASWC PPCRMIAPVF ADLAKKFMSS AIFFKVDVDE LQNVAQEFGV EAMPTFVFIK DGNVVDKVVG
101: ARKEDLHATI AKHTGVATA

Best Arabidopsis Sequence Match ( AT1G19730.1 )
(BLAST)

001: MAAEEGQVIG CHTNDVWTVQ LDKAKESNKL IVIDFTASWC PPCRMIAPIF NDLAKKFMSS AIFFKVDVDE LQSVAKEFGV EAMPTFVFIK AGEVVDKLVG
101: ANKEDLQAKI VKHTGVTTA

Arabidopsis Description

TRX4Thioredoxin H4 [Source:UniProtKB/Swiss-Prot;Acc:Q39239]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.