Factsheet for Bra014691.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70695	Canola	cytosol	96.27	93.48
Bra007245.1-P	Field mustard	plastid	76.12	72.86
AT3G56420.2	Thale cress	mitochondrion	83.58	72.73
Os01t0168200-01	Rice	plasma membrane	44.03	45.04
Zm00001d037499_P001	Maize	cytosol	42.54	42.86
TraesCS1D01G114000.1	Wheat	cytosol	41.79	42.75
TraesCS1B01G132600.1	Wheat	cytosol	41.79	42.75
TraesCS1A01G112400.1	Wheat	cytosol	41.79	42.75
EES19112	Sorghum	cytosol	42.54	42.54
Solyc03g095500.2.1	Tomato	cytosol	44.03	42.45
PGSC0003DMT400059108	Potato	cytosol	44.03	42.45
GSMUA_Achr5P27870_001	Banana	cytosol	43.28	41.13
Os05t0169000-01	Rice	cytosol	40.3	40.91
KXG31771	Sorghum	cytosol	44.03	39.33
HORVU1Hr1G024700.4	Barley	cytosol	41.79	38.36
Zm00001d039710_P004	Maize	cytosol	41.04	38.19
GSMUA_Achr8P01700_001	Banana	cytosol	39.55	38.13
Bra040055.1-P	Field mustard	cytosol	38.81	37.96
Bra025762.1-P	Field mustard	cytosol	32.84	36.97
Bra036839.1-P	Field mustard	cytosol	30.6	35.96
Bra012872.1-P	Field mustard	cytosol	30.6	35.96
Bra036335.1-P	Field mustard	cytosol	30.6	35.04
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	42.54	34.55
Bra001346.1-P	Field mustard	cytosol	41.79	34.15
Bra014037.1-P	Field mustard	cytosol	29.85	33.9
Bra027469.1-P	Field mustard	cytosol	29.85	32.52
Bra028445.1-P	Field mustard	cytosol	31.34	31.58
Bra031769.1-P	Field mustard	cytosol	29.1	30.95
Bra040318.1-P	Field mustard	cytosol	29.1	30.0
Bra017898.1-P	Field mustard	cytosol	26.12	27.34
Bra027837.1-P	Field mustard	cytosol	25.37	26.56
Bra016258.1-P	Field mustard	cytosol	27.61	24.5
Bra003977.1-P	Field mustard	cytosol	26.87	24.16
Bra003976.1-P	Field mustard	cytosol	24.63	23.4
Bra023564.1-P	Field mustard	plastid	23.88	17.11
Bra021417.1-P	Field mustard	plastid	20.9	15.38
Bra040596.1-P	Field mustard	plastid	20.15	14.92

Protein Annotations

MapMan:10.6.1	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra014691	EnsemblPlants:Bra014691.1	EnsemblPlants:Bra014691.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006662	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	GO:GO:0055114	InterPro:IPR013766
UniProt:M4DDX2	PFAM:PF00085	PIRSF:PIRSF000077	PRINTS:PR00421	ScanProsite:PS00194	PFscan:PS51352
PANTHER:PTHR10438	PANTHER:PTHR10438:SF267	SUPFAM:SSF52833	InterPro:Thioredoxin	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_CS
InterPro:Thioredoxin_domain	UniParc:UPI000254478A	SEG:seg	:	:	:

Description

AT3G56420 (E=1e-058) | INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: ATCXXS2 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1); protein disulfide isomerase (TAIR:AT2G40790.1); Has 6839 Blast hits to 6830 proteins in 1457 species: Archae - 125; Bacteria - 3259; Metazoa - 916; Fungi - 420; Plants - 647; Viruses - 6; Other Eukaryotes - 1466 (source: NCBI BLink).

Coordinates

chrA04:+:2275802..2276436

Molecular Weight (calculated)

15347.4 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.466

Length

134 amino acids

Sequence
(BLAST)

001: MLRNRSNNKA RARSQHGSKE NVYSISRIEK WEEKITEANN NGKILVVYFS APWCVPCKKI EPVFRELASR YPSMIFVTID VEELAEFSDE WNVEATPTIV
101: FLKDGRQMDK LVGAETSELQ KKTAAAAELL IRKP

Best Arabidopsis Sequence Match ( AT3G56420.1 )
(BLAST)

001: MGNRCARTSC CRKLWSCICC CSNNNNNSYG QTRSQHGSKG KVHPVSRIEK WEEKITEANN HGKILVVNFS APWCVPCKKI EPVFRDLASR YPSMIFVTVD
101: VEELAEFSNE WNVEATPTVV FLKDGRQMDK LVGAETSELQ KKTAAAADLF LRKP

Arabidopsis Description

Putative thioredoxin H10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXZ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.