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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra001009.1-P
Bra001391.1-P
Bra001649.1-P
Bra001661.1-P
Bra001865.1-P
Bra002259.1-P
Bra002260.1-P
Bra002261.1-P
Bra003163.1-P
Bra003633.1-P
Bra003882.1-P
Bra004138.1-P
Bra006033.1-P
Bra006517.1-P
Bra007038.1-P
Bra008030.1-P
Bra008385.1-P
Bra008784.1-P
Bra009081.1-P
Bra009583.1-P
Bra009713.1-P
Bra010114.1-P
Bra011818.1-P
Bra012100.1-P
Bra012247.1-P
Bra012658.1-P
Bra013634.1-P
Bra014852.1-P
Bra015538.1-P
Bra016062.1-P
Bra016455.1-P
Bra016729.1-P
Bra018184.1-P
Bra018232.1-P
Bra018379.1-P
Bra019366.1-P
Bra019722.1-P
Bra020006.1-P
Bra020060.1-P
Bra020061.1-P
Bra020062.1-P
Bra020836.1-P
Bra021214.1-P
Bra021241.1-P
Bra021681.1-P
Bra022190.1-P
Bra022356.1-P
Bra022551.1-P
Bra022853.1-P
Bra023446.1-P
Bra023598.1-P
Bra025842.1-P
Bra026231.1-P
Bra026478.1-P
Bra026904.1-P
Bra027544.1-P
Bra028469.1-P
Bra028615.1-P
Bra028932.1-P
Bra029171.1-P
Bra029697.1-P
Bra030666.1-P
Bra031351.1-P
Bra032002.1-P
Bra032196.1-P
Bra033140.1-P
Bra033737.1-P
Bra033796.1-P
Bra034166.1-P
Bra034864.1-P
Bra034914.1-P
Bra034924.1-P
Bra035006.1-P
Bra035074.1-P
Bra035909.1-P
Bra036934.1-P
Bra037560.1-P
Bra038378.1-P
Bra038472.1-P
Bra039130.1-P
Bra039506.1-P
Bra039747.1-P
Bra039987.1-P
Bra040049.1-P
Bra040146.1-P
Bra040162.1-P
Bra040213.1-P
Bra041036.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G51030.1 Bra015538.1-P AT1G06950.1 23615222
AT3G51030.1 Bra030666.1-P AT1G06950.1 23615222
AT3G51030.1 Bra020006.1-P AT1G09630.1 23615222
AT3G51030.1 Bra012247.1-P AT1G20760.1 23615222
AT3G51030.1 Bra016455.1-P AT1G20760.1 23615222
AT3G51030.1 Bra025842.1-P AT1G20760.1 23615222
AT3G51030.1 Bra032196.1-P AT1G43890.1 23615222
AT3G51030.1 Bra034924.1-P AT1G43890.1 23615222
AT3G51030.1 Bra036934.1-P AT1G43890.1 23615222
AT3G51030.1 Bra022356.1-P AT1G49240.1 23615222
AT3G51030.1 Bra037560.1-P AT1G49240.1 23615222
AT3G51030.1 Bra004138.1-P AT1G65980.1 23615222
AT3G51030.1 Bra038378.1-P AT1G65980.1 23615222
AT3G51030.1 Bra039747.1-P AT1G65980.1 23615222
AT3G51030.1 Bra003882.1-P AT1G72370.1 23615222
AT3G51030.1 Bra008030.1-P AT1G72370.1 23615222
AT3G51030.1 Bra016062.1-P AT1G72370.1 23615222
AT3G51030.1 Bra003633.1-P AT1G78900.1 23615222
AT3G51030.1 Bra008385.1-P AT1G78900.1 23615222
AT3G51030.1 Bra035074.1-P AT1G78900.1 23615222
AT3G51030.1 Bra018379.1-P AT2G29550.1 23615222
AT3G51030.1 Bra039987.1-P AT2G29550.1 23615222
AT3G51030.1 Bra018232.1-P AT2G31570.1 23615222
AT3G51030.1 Bra022853.1-P AT2G31570.1 23615222
AT3G51030.1 Bra001009.1-P AT3G01290.1 23615222
AT3G51030.1 Bra039130.1-P AT3G01290.1 23615222
AT3G51030.1 Bra032002.1-P AT3G03270.1 23615222
AT3G51030.1 Bra016729.1-P AT3G04120.1 23615222
AT3G51030.1 Bra019722.1-P AT3G04120.1 23615222
AT3G51030.1 Bra026904.1-P AT3G04120.1 23615222
AT3G51030.1 Bra040146.1-P AT3G04120.1 23615222
AT3G51030.1 Bra040213.1-P AT3G04120.1 23615222
AT3G51030.1 Bra029697.1-P AT3G08510.1 23615222
AT3G51030.1 Bra040049.1-P AT3G08510.1 23615222
AT3G51030.1 Bra001391.1-P AT3G11130.1 23615222
AT3G51030.1 Bra034166.1-P AT3G11130.1 23615222
AT3G51030.1 Bra034864.1-P AT3G11130.1 23615222
AT3G51030.1 Bra001649.1-P AT3G17020.1 23615222
AT3G51030.1 Bra021214.1-P AT3G17020.1 23615222
AT3G51030.1 Bra022190.1-P AT3G17020.1 23615222
AT3G51030.1 Bra038472.1-P AT3G17020.1 23615222
AT3G51030.1 Bra001661.1-P AT3G17390.1 23615222
AT3G51030.1 Bra021241.1-P AT3G17390.1 23615222
AT3G51030.1 Bra041036.1-P AT3G17390.1 23615222
AT3G51030.1 Bra001865.1-P AT3G22370.1 23615222
AT3G51030.1 Bra031351.1-P AT3G22370.1 23615222
AT3G51030.1 Bra028469.1-P AT3G27380.1 23615222
AT3G51030.1 Bra021681.1-P AT3G44310.1 23615222
AT3G51030.1 Bra023598.1-P AT3G44310.1 23615222
AT3G51030.1 Bra028932.1-P AT3G44310.1 23615222
AT3G51030.1 Bra035006.1-P AT3G44310.1 23615222
AT3G51030.1 Bra003163.1-P AT3G53990.1 23615222
AT3G51030.1 Bra007038.1-P AT3G53990.1 23615222
AT3G51030.1 Bra014852.1-P AT3G53990.1 23615222
AT3G51030.1 Bra033140.1-P AT4G11600.1 23615222
AT3G51030.1 Bra026231.1-P AT4G17170.1 23615222
AT3G51030.1 Bra012658.1-P AT4G17530.1 23615222
AT3G51030.1 Bra040162.1-P AT4G17530.1 23615222
AT3G51030.1 Bra013634.1-P AT4G22710.1 23615222
AT3G51030.1 Bra019366.1-P AT4G22710.1 23615222
AT3G51030.1 Bra020836.1-P AT4G22710.1 23615222
AT3G51030.1 Bra011818.1-P AT4G39990.1 23615222
AT3G51030.1 Bra009583.1-P AT5G02500.1 23615222
AT3G51030.1 Bra035909.1-P AT5G02500.1 23615222
AT3G51030.1 Bra006033.1-P AT5G09810.1 23615222
AT3G51030.1 Bra009081.1-P AT5G09810.1 23615222
AT3G51030.1 Bra028615.1-P AT5G09810.1 23615222
AT3G51030.1 Bra008784.1-P AT5G14040.1 23615222
AT3G51030.1 Bra023446.1-P AT5G14040.1 23615222
AT3G51030.1 Bra002259.1-P AT5G19760.1 23615222
AT3G51030.1 Bra020060.1-P AT5G19760.1 23615222
AT3G51030.1 Bra002260.1-P AT5G19770.1 23615222
AT3G51030.1 Bra002261.1-P AT5G19770.1 23615222
AT3G51030.1 Bra006517.1-P AT5G19770.1 23615222
AT3G51030.1 Bra020061.1-P AT5G19770.1 23615222
AT3G51030.1 Bra020062.1-P AT5G19770.1 23615222
AT3G51030.1 Bra009713.1-P AT5G23890.1 23615222
AT3G51030.1 Bra026478.1-P AT5G23890.1 23615222
AT3G51030.1 Bra027544.1-P AT5G44340.1 23615222
AT3G51030.1 Bra033737.1-P AT5G44340.1 23615222
AT3G51030.1 Bra039506.1-P AT5G44340.1 23615222
AT3G51030.1 Bra022551.1-P AT5G51480.1 23615222
AT3G51030.1 Bra029171.1-P AT5G51480.1 23615222
AT3G51030.1 Bra034914.1-P AT5G51480.1 23615222
AT3G51030.1 Bra010114.1-P AT5G62700.1 23615222
AT3G51030.1 Bra018184.1-P AT5G62700.1 23615222
AT3G51030.1 Bra033796.1-P AT5G62700.1 23615222
AT3G51030.1 Bra012100.1-P AT5G66760.1 23615222
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77974 Canola cytosol 99.12 99.12
Bra012872.1-P Field mustard cytosol 98.25 98.25
AT3G51030.1 Thale cress cytosol 90.35 90.35
KRH76717 Soybean endoplasmic reticulum, nucleus 78.07 74.17
KRH28739 Soybean cytosol 76.32 72.5
VIT_04s0023g02700.t01 Wine grape cytosol 72.81 72.17
PGSC0003DMT400009306 Potato cytosol 74.56 72.03
Solyc02g084710.2.1 Tomato extracellular 73.68 71.19
GSMUA_Achr4P22400_001 Banana cytosol, unclear 68.42 68.42
VIT_18s0001g13250.t01 Wine grape cytosol 66.67 66.67
Bra036335.1-P Field mustard cytosol 64.04 62.39
GSMUA_Achr2P17610_001 Banana cytosol 59.65 59.65
Bra014037.1-P Field mustard cytosol 59.65 57.63
Bra025762.1-P Field mustard cytosol 59.65 57.14
CDX73752 Canola cytosol, mitochondrion 98.25 50.91
Bra027469.1-P Field mustard cytosol 54.39 50.41
VIT_18s0001g13240.t01 Wine grape cytosol 57.02 41.14
Bra040318.1-P Field mustard cytosol 42.98 37.69
Bra028445.1-P Field mustard cytosol 42.11 36.09
Bra031769.1-P Field mustard cytosol 37.72 34.13
Bra017898.1-P Field mustard cytosol 37.72 33.59
Bra027837.1-P Field mustard cytosol 36.84 32.81
Bra040055.1-P Field mustard cytosol 37.72 31.39
Bra014691.1-P Field mustard cytosol, mitochondrion 35.96 30.6
Bra003976.1-P Field mustard cytosol 36.84 29.79
Bra007245.1-P Field mustard plastid 35.96 29.29
Bra001346.1-P Field mustard cytosol 41.23 28.66
Bra003977.1-P Field mustard cytosol 35.96 27.52
Bra016258.1-P Field mustard cytosol 35.09 26.49
Bra023564.1-P Field mustard plastid 36.84 22.46
Bra021417.1-P Field mustard plastid 34.21 21.43
Bra040596.1-P Field mustard plastid 33.33 20.99
Protein Annotations
MapMan:10.6.1MapMan:18.7.2Gene3D:3.40.30.10EnsemblPlantsGene:Bra036839EnsemblPlants:Bra036839.1EnsemblPlants:Bra036839.1-P
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006662GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0015035GO:GO:0019725GO:GO:0045454GO:GO:0055114
InterPro:IPR013766UniProt:M4F6X9PFAM:PF00085PIRSF:PIRSF000077PRINTS:PR00421ScanProsite:PS00194
PFscan:PS51352PANTHER:PTHR10438PANTHER:PTHR10438:SF370SUPFAM:SSF52833InterPro:ThioredoxinInterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_CSInterPro:Thioredoxin_domainUniParc:UPI0002542C5F:::
Description
AT3G51030 (E=8e-058) ATTRX1, ATTRX H1 | ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor
Coordinates
chrA09:-:25460462..25461435
Molecular Weight (calculated)
12636.4 Da
IEP (calculated)
5.158
GRAVY (calculated)
0.039
Length
114 amino acids
Sequence
(BLAST)
001: MAGEEGQVIA CHTVEAWNEQ LQKGNDSKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV IFLKVDIDEL KSVASDWAIE SMPTFMFMKE GKIVDKVVGA
101: KKDELQSTIA KHMA
Best Arabidopsis Sequence Match ( AT3G51030.1 )
(BLAST)
001: MASEEGQVIA CHTVETWNEQ LQKANESKTL VVVDFTASWC GPCRFIAPFF ADLAKKLPNV LFLKVDTDEL KSVASDWAIQ AMPTFMFLKE GKILDKVVGA
101: KKDELQSTIA KHLA
Arabidopsis Description
TRX1Thioredoxin H1 [Source:UniProtKB/Swiss-Prot;Acc:P29448]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.