Factsheet for Bra009713.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88055	Canola	plastid	96.89	96.89
Bra026478.1-P	Field mustard	plastid	70.71	73.96
AT5G23890.1	Thale cress	plastid	71.03	69.98
Zm00001d041148_P001	Maize	cytosol	22.0	57.26
Solyc06g036040.1.1	Tomato	plastid	16.42	55.23
Solyc06g036030.1.1	Tomato	cytosol	7.73	54.55
PGSC0003DMT400076923	Potato	golgi, mitochondrion	25.43	52.09
Bra022589.1-P	Field mustard	plastid	37.55	48.14
KRH38456	Soybean	plastid	43.45	45.92
PGSC0003DMT400040825	Potato	plastid	45.17	44.64
Solyc03g025530.2.1	Tomato	plastid	44.74	44.22
KRH08938	Soybean	plastid	44.74	42.77
KRH35286	Soybean	plastid	41.42	41.02
KRG91542	Soybean	plastid	30.58	40.66
GSMUA_Achr11P...	Banana	plastid	40.02	38.73
TraesCS5D01G563800.1	Wheat	golgi	36.59	38.31
VIT_16s0050g00600.t01	Wine grape	plastid	44.31	38.28
GSMUA_Achr5P12350_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	37.77	38.14
Zm00001d020493_P001	Maize	cytosol	16.52	37.65
Os03t0862100-01	Rice	plastid	37.02	37.58
TraesCS5B01G572300.1	Wheat	plastid	35.94	36.85
TraesCS7B01G000400.2	Wheat	plastid	36.48	36.6
EER93049	Sorghum	plastid	36.59	36.08
HORVU5Hr1G124610.7	Barley	mitochondrion	36.37	35.8
Zm00001d034935_P007	Maize	plastid	36.8	33.83
Bra017353.1-P	Field mustard	plastid	16.09	27.78

Protein Annotations

EnsemblPlants:Bra009713.1	EnsemblPlants:Bra009713.1-P	EnsemblPlantsGene:Bra009713	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
ncoils:Coil	PANTHER:PTHR33740	PANTHER:PTHR33740:SF6	SEG:seg	TMHMM:TMhelix	UniParc:UPI000253F10A
UniProt:M4CZR6	MapMan:35.2	:	:	:	:

Description

AT5G23890 (E=7e-283) | LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: S-layer homology region (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52410.2); Has 47782 Blast hits to 27307 proteins in 1672 species: Archae - 444; Bacteria - 6951; Metazoa - 22630; Fungi - 3561; Plants - 1682; Viruses - 252; Other Eukaryotes - 12262 (source: NCBI BLink).

Coordinates

chrA06:+:16703941..16707928

Molecular Weight (calculated)

101265.0 Da

IEP (calculated)

4.316

GRAVY (calculated)

-0.466

Length

932 amino acids

Sequence
(BLAST)

001: MASATATWTP TSLQLRLALS SGVRRKSNAV FLRPSRIGRK SGCGVVCCVS QKPEVEAWTG SDSSNPPADG LAGWADSGNG NGNKSSRAKK KSLIEGVVGA
101: GVAAIVLFAG LSYAVSSFNK RNHARLKPEL TSQQESVLIS SDETPSDEAK VANSEENILK EEVESIENND IGQQGDEDKI LGTEDSSLDG IVSDGSDATE
201: NITSETTPEA ELKLHVQSDP DMPESEKIIS ESESIDSQKS DITGAQNPEG ADRLPDTEPT NVSDLENQVD SQKEDSMSSL SDTDAYAATE TVAAGVLVAS
301: QSDSTSDPHT VPLNAAGSAF STVTEDLPEV NGTPEDLAAG SLSSISDIDT AKEVESSETP VSEESSYLSK NELTVDSEVE LTDNGLLETP SGGSAFSSAG
401: IPAPSISFQV NPGKILVPAA ADQVQCQAFA ALQVLKVIET DIKPSDLCTR REYARWLVSA SSALSRNTTS KVYPAMYIEN VTELAFDDIT PEDPDFSSIQ
501: GLAEAGLITS KLSNRDLLND VEGTFLFSPE SLLSRQDLIS WKMALEKRQL PVADKKMLYD LSGFIDIEKI NPDAWPAIIA DLSTGEQGIA ALAFGCTRLF
601: QPHKPVTKAQ AAIALSNGEA SDIVIEELAR IEAESMAEKA VSAHNALVAE VEKDVNASFE KELSMEREKI EAVEKMAEQV KLELEQLREK REEENLVLVK
701: ERAAVESEME VLSRLRHEAE EKLEDLMSNK AEISFEKEKV SSLRKEAEEE SQRISKLQYE LEVERKALSM ARSWAEEEGK RAREQARALE EARKRWETNG
801: LRVIVDKDLQ ENVETEQSVL LNTVERSSIE GTEERAQTLM DKLKEMAESV SGKSREVISM VMEKIRSWIM VLKEYAENLG KRAGEMSEAA VVKAKGAAKE
901: VEKGTVQVGD KVKRMAEECR DGVGKITQRF KT

Best Arabidopsis Sequence Match ( AT5G23890.1 )
(BLAST)

001: MASATATWTP TSLQLRLALS SGVRRKSPAV YLRPSRLARK SGYGIVCVSQ KPEVDAWTGS DSSKSSADNL AGWDDSDNDD KKSSRVKKKS LIEGVVGAGV
101: AGIILFLGLS YAAASFSKRT KKQEMHSLTS QQESMIQSSD EISSDEIKVA NSEESNLKDE DKSIESNDVA QKSDEGSGED KLLGKETSSF DGVMTDEADA
201: TESIPQNTPE ADLMVNAETD PETAESEKII SESKSLLDSS TEPILLDAES SNLVGVENTN SEDPESLLNT EPTNVSDLEN HVNSQKEDSL SSLSGIDAYA
301: ASGTVTELPE VSSQLDSTSK PQIVPLNDTE TAFATAEELS EVNGTPEYFE TSDWSSISDI DTTKELESSK SPVPESTDGS KDELNIYSQD ELDDNRMLLE
401: IPSGGSAFSS AGIPAPFMSV IVNPGKILVP VAADQIQCQA FAALQVLKVI ETDTQPSDLC TRREYARWLI SASSALSRNT TSKVYPAMYI ENVTELAFDD
501: ITPEDPDFSS IQGLAEAGLI ASKLSNRDLL DDVEGTFLFS PESLLSRQDL ISWKMALEKR QLPEADKKML YKLSGFIDID KINPDAWPSI IADLSTGEQG
601: IAALAFGCTR LFQPHKPVTK GQAAIALSSG EASDIVSEEL ARIEAESMAE KAVSAHNALV AEVEKDVNAS FEKELSMERE KIEAVEKMAE LAKVELEQLR
701: EKREEENLAL VKERAAVESE MEVLSRLRRD AEEKLEDLMS NKAEITFEKE RVFNLRKEAE EESQRISKLQ YELEVERKAL SMARSWAEEE AKKAREQGRA
801: LEEARKRWET NGLRVVVDKD LQETSSRETE QSIVLNEMER SSVEETERRA KTLMDKLKEM AGTVSGKSRE VIFTVMEKIR LWITVLKEYA VNLGKRAGEM
901: RDAAIVRAKG AAADVEQGTV QVSDKVKKMA EECRDGVGKI SQRFKT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.