Factsheet for GSMUA_Achr11P17550_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041148_P001	Maize	cytosol	23.47	63.13
Solyc06g036030.1.1	Tomato	cytosol	7.48	54.55
Solyc06g036040.1.1	Tomato	plastid	15.37	53.43
PGSC0003DMT400076923	Potato	golgi, mitochondrion	23.47	49.67
GSMUA_Achr5P12350_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	44.13	46.05
CDX91640	Canola	plastid	34.06	45.18
CDY27070	Canola	plastid	33.96	45.04
Bra022589.1-P	Field mustard	plastid	33.44	44.29
AT5G52410.2	Thale cress	plastid	34.58	43.76
KRH38456	Soybean	plastid	39.56	43.2
Os03t0862100-01	Rice	plastid	40.08	42.05
TraesCS5D01G563800.1	Wheat	golgi	38.63	41.8
PGSC0003DMT400040825	Potato	plastid	40.39	41.25
Solyc03g025530.2.1	Tomato	plastid	40.19	41.04
TraesCS5B01G572300.1	Wheat	plastid	38.21	40.48
TraesCS7B01G000400.2	Wheat	plastid	38.94	40.37
Bra009713.1-P	Field mustard	plastid	38.73	40.02
KRH08938	Soybean	plastid	40.19	39.69
CDX88055	Canola	plastid	38.32	39.59
CDX80394	Canola	plastid	38.32	39.55
EER93049	Sorghum	plastid	38.21	38.94
CDY16870	Canola	plastid	36.66	38.92
AT5G23890.1	Thale cress	plastid	38.21	38.9
HORVU5Hr1G124610.7	Barley	mitochondrion	38.21	38.86
Zm00001d020493_P001	Maize	cytosol	16.41	38.63
Bra026478.1-P	Field mustard	plastid	35.51	38.38
CDX87153	Canola	plastid	35.93	38.27
KRH35286	Soybean	plastid	36.97	37.83
KRG91542	Soybean	plastid	27.31	37.52
VIT_16s0050g00600.t01	Wine grape	plastid	41.43	36.98
Zm00001d034935_P007	Maize	plastid	37.9	36.0
GSMUA_Achr2P07070_001	Banana	extracellular, golgi	9.97	29.45
GSMUA_Achr2P07080_001	Banana	endoplasmic reticulum	7.37	26.49

Protein Annotations

EnsemblPlants:GSMUA_Achr11P17550_001	EnsemblPlants:GSMUA_Achr11T17550_001	EnsemblPlantsGene:GSMUA_Achr11G17550_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR001119	InterPro:SLH_dom	ncoils:Coil	PANTHER:PTHR33740	PANTHER:PTHR33740:SF3	PFAM:PF00395
SEG:seg	TMHMM:TMhelix	UniParc:UPI00029591CE	UniProt:M0RT35	MapMan:35.2	:

Description

Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G17550_001]

Coordinates

chr11:+:19092048..19099991

Molecular Weight (calculated)

105471.0 Da

IEP (calculated)

4.389

GRAVY (calculated)

-0.384

Length

963 amino acids

Sequence
(BLAST)

001: MASACRPSCP SSLQIRFGLR CRESPPVLLR VRFRPLDRRF GLVFAAGEAA GGERRGEPWS GSNGSPDSFA GWSAEENGGG KPPEEENFGG VLGAALAGLL
101: FAAGVAFATL SLTRAKQEMQ PLSMEQERLI NSDTNENLDQ DFILPSTINE EASKSISDAE HHIEASLVHN TKSADVGSDA TERASDQGDL EMVEDIDKIP
201: VPAGFSASTP ELDAHIIDFS PDRSNLKDLV GTTYSETQES VTGDLGITIA HDDLIHLDTV STNHITNYHD GNTKPAETSN SEVQLDLLVG SDSQFKTDSV
301: DNLNTQTKDV VLNPVSVQED QDFAQNDMQF PIEVSTSDPP SCNTHESGPL ETSLSLDFDQ IEQLMLQPDS ISFPDEHKLS KTGSSVSHFV SISADPNLKE
401: PDTEFDGQID RSPLSEPQLN KALSHSGIPA PCHISATQQL SPGKVLVPAL VDQVQGQALA ALQVLKVIEA DVQPGDICTR REYARWLVTA SSNLSRYIFS
501: KIYPAMYIEN VTELAFDDVT PEDPDFPCIQ GLAEAGLISS KLSRTDLGHT VSDQQDYILF SPESPVSRQD LISWKMATER RQLPEVDIND IYQCCGYIDI
601: HRINPDAWPA LVADLSSGGQ SITALAFGCT RLFQPDKPIT KAQAAIALAT GDAAEIVSEE LARIEAESLA ETAVSADAAL LAQVEKDVNA NFEKELAKER
701: EKAKALEKLA EEAKLELDRL QAEREEEHIA LIKGHAVVES EMEVLSRLRH EAEEQLQSLM SNQLEISFEK DRINKLRKEA ESQNQVIAQL QSELEVERKA
801: LFMARSWAEE EAKRAREQAK ALEEAKERWE GHGTVVVDAD LVRDADVGTA LEQPQVDETI QRGESLVEKL KTMAAELRIR SAAVIEKIIE KIISLIAALK
901: WQASAASDHT MKLWDNVFSK AKSSVDVFHE SASGFGSVAA DKARRIVEDC KEGVEKITHK FKT

Best Arabidopsis Sequence Match ( AT5G23890.2 )
(BLAST)

001: MHSLTSQQES MIQSSDEISS DEIKVANSEE SNLKDEDKSI ESNDVAQKSD EGSGEDKLLG KETSSFDGVM TDEADATESI PQNTPEADLM VNAETDPETA
101: ESEKIISESK SLLDSSTEPI LLDAESSNLV GVENTNSEDP ESLLNTEPTN VSDLENHVNS QKEDSLSSLS GIDAYAASGT VTELPEVSSQ LDSTSKPQIV
201: PLNDTETAFA TAEELSEVNG TPEYFETSDW SSISDIDTTK ELESSKSPVP ESTDGSKDEL NIYSQDELDD NRMLLEIPSG GSAFSSAGIP APFMSVIVNP
301: GKILVPVAAD QIQCQAFAAL QVLKVIETDT QPSDLCTRRE YARWLISASS ALSRNTTSKV YPAMYIENVT ELAFDDITPE DPDFSSIQGL AEAGLIASKL
401: SNRDLLDDVE GTFLFSPESL LSRQDLISWK MALEKRQLPE ADKKMLYKLS GFIDIDKINP DAWPSIIADL STGEQGIAAL AFGCTRLFQP HKPVTKGQAA
501: IALSSGEASD IVSEELARIE AESMAEKAVS AHNALVAEVE KDVNASFEKE LSMEREKIEA VEKMAELAKV ELEQLREKRE EENLALVKER AAVESEMEVL
601: SRLRRDAEEK LEDLMSNKAE ITFEKERVFN LRKEAEEESQ RISKLQYELE VERKALSMAR SWAEEEAKKA REQGRALEEA RKRWETNGLR VVVDKDLQET
701: SSRETEQSIV LNEMERSSVE ETERRAKTLM DKLKEMAGTV SGKSREVIFT VMEKIRLWIT VLKEYAVNLG KRAGEMRDAA IVRAKGAAAD VEQGTVQVSD
801: KVKKMAEECR DGVGKISQRF KT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.