Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91640 | Canola | plastid | 71.09 | 74.52 |
| CDY27070 | Canola | plastid | 71.09 | 74.52 |
| Bra022589.1-P | Field mustard | plastid | 70.56 | 73.87 |
| Zm00001d041148_P001 | Maize | cytosol | 27.33 | 58.1 |
| Solyc06g036030.1.1 | Tomato | cytosol | 9.72 | 56.06 |
| Solyc06g036040.1.1 | Tomato | plastid | 19.05 | 52.35 |
| PGSC0003DMT400076923 | Potato | golgi, mitochondrion | 29.57 | 49.45 |
| KRH38456 | Soybean | plastid | 46.39 | 40.02 |
| AT5G23890.1 | Thale cress | plastid | 47.04 | 37.84 |
| PGSC0003DMT400040825 | Potato | plastid | 46.52 | 37.54 |
| Solyc03g025530.2.1 | Tomato | plastid | 46.12 | 37.22 |
| Zm00001d020493_P001 | Maize | cytosol | 19.45 | 36.19 |
| KRH08938 | Soybean | plastid | 45.99 | 35.9 |
| TraesCS5D01G563800.1 | Wheat | golgi | 41.66 | 35.62 |
| GSMUA_Achr5P12350_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 42.97 | 35.43 |
| GSMUA_Achr11P... | Banana | plastid | 43.76 | 34.58 |
| TraesCS7B01G000400.2 | Wheat | plastid | 42.18 | 34.55 |
| KRG91542 | Soybean | plastid | 31.8 | 34.52 |
| KRH35286 | Soybean | plastid | 42.44 | 34.33 |
| Os03t0862100-01 | Rice | plastid | 41.13 | 34.1 |
| TraesCS5B01G572300.1 | Wheat | plastid | 40.34 | 33.77 |
| HORVU5Hr1G124610.7 | Barley | mitochondrion | 41.79 | 33.58 |
| VIT_16s0050g00600.t01 | Wine grape | plastid | 47.04 | 33.18 |
| EER93049 | Sorghum | plastid | 40.74 | 32.8 |
| Zm00001d034935_P007 | Maize | plastid | 41.52 | 31.16 |
| AT3G25680.1 | Thale cress | plastid | 18.53 | 25.27 |
Protein Annotations
| MapMan:35.2 | EntrezGene:835317 | ProteinID:AED96211.1 | ArrayExpress:AT5G52410 | EnsemblPlantsGene:AT5G52410 | RefSeq:AT5G52410 |
| TAIR:AT5G52410 | RefSeq:AT5G52410-TAIR-G | EnsemblPlants:AT5G52410.2 | TAIR:AT5G52410.2 | Unigene:At.28794 | ncoils:Coil |
| UniProt:F4KG64 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009536 | GO:GO:0009941 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001119 | RefSeq:NP_974927.1 |
| PFAM:PF00395 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33740 | PANTHER:PTHR33740:SF3 | InterPro:SLH_dom |
| TMHMM:TMhelix | UniParc:UPI000034F2F5 | SEG:seg | : | : | : |
Description
CONTAINS InterPro DOMAIN/s: S-layer homology domain (InterPro:IPR001119); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - /.../ Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G52410]
Coordinates
chr5:+:21275956..21279443
Molecular Weight (calculated)
85136.5 Da
IEP (calculated)
5.048
GRAVY (calculated)
-0.543
Length
761 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTMATWTP SSLQLRIALN HGIFKAPERA KMTKLSRRLR ISCVAQNAEP GRDSGESNGS DRFRGWADSG DDENNSRGGD WFKGTLLSGV AGMVLFVGLT
101: YAALSSKRNV LRPKVEVMVT TVTKSSIDQI STDENEGNIV TSQDNQESYR AFPFLDVSLD SQVLSPDEID VASKSTSTRK DNEEAEKASV SSAERYTSST
201: ELDGVDTHTS QIPNEKQKAR RYTGIPAPST VPQVDSLKPI FPTVVDPVQS QMFAALQALK VIESDALPYD LCTRREFARW VVSASNTLSR NSASKVYPAM
301: YIENVTELAF DDITPEDPDF PFIQGLAEAG LISSKLSNNN MPSSESSRVT FSPESPLTRQ DLLSWKMALE FRQLPEADSK KLYQLSGFLD IDKINPEAWP
401: ALIADLSAGE HGITALSFGR TRLFQPSKAV TKAQTAVSLA IGDAFEVVGE ELARIEAEAM AENVVCAHNE LVAQVEKDIN ASFEKELLRE KEIVDAVEKL
501: AEEAKSELAR LRVEKEEETL ALERERTSIE TEMEALARIR NELEEQLQSL ASNKAEMSYE KERFDRLQKQ VEDENQEILR LQNELEVERN ALSIARDWAK
601: DEARRAREQA KVLEEARGRW EKYGLKVIVD SDLHEQTTKT ESTWLNAGKQ NHVEGTMKRA GNLIAKLKKM AKDVGEKSRE VIYLIIEKIS LLISALKQQV
701: HGMENKAKDL KIKTKSKAEE VWRQTSLRAD EIRNISIVKA KETVEEFKDR VGKLGEKFKS K
101: YAALSSKRNV LRPKVEVMVT TVTKSSIDQI STDENEGNIV TSQDNQESYR AFPFLDVSLD SQVLSPDEID VASKSTSTRK DNEEAEKASV SSAERYTSST
201: ELDGVDTHTS QIPNEKQKAR RYTGIPAPST VPQVDSLKPI FPTVVDPVQS QMFAALQALK VIESDALPYD LCTRREFARW VVSASNTLSR NSASKVYPAM
301: YIENVTELAF DDITPEDPDF PFIQGLAEAG LISSKLSNNN MPSSESSRVT FSPESPLTRQ DLLSWKMALE FRQLPEADSK KLYQLSGFLD IDKINPEAWP
401: ALIADLSAGE HGITALSFGR TRLFQPSKAV TKAQTAVSLA IGDAFEVVGE ELARIEAEAM AENVVCAHNE LVAQVEKDIN ASFEKELLRE KEIVDAVEKL
501: AEEAKSELAR LRVEKEEETL ALERERTSIE TEMEALARIR NELEEQLQSL ASNKAEMSYE KERFDRLQKQ VEDENQEILR LQNELEVERN ALSIARDWAK
601: DEARRAREQA KVLEEARGRW EKYGLKVIVD SDLHEQTTKT ESTWLNAGKQ NHVEGTMKRA GNLIAKLKKM AKDVGEKSRE VIYLIIEKIS LLISALKQQV
701: HGMENKAKDL KIKTKSKAEE VWRQTSLRAD EIRNISIVKA KETVEEFKDR VGKLGEKFKS K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.