CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38456	Soybean	plastid	80.92	89.46
Zm00001d041148_P001	Maize	cytosol	23.18	63.13
KRG91542	Soybean	plastid	43.38	60.34
KRH35286	Soybean	plastid	57.54	59.62
Solyc06g036040.1.1	Tomato	plastid	16.92	59.57
Solyc06g036030.1.1	Tomato	cytosol	7.59	56.06
PGSC0003DMT400076923	Potato	golgi, mitochondrion	25.95	55.6
PGSC0003DMT400040825	Potato	plastid	46.97	48.57
CDX91640	Canola	plastid	35.79	48.07
Solyc03g025530.2.1	Tomato	plastid	46.26	47.83
CDY27070	Canola	plastid	35.59	47.8
Bra022589.1-P	Field mustard	plastid	34.87	46.77
CDY16870	Canola	plastid	43.08	46.31
AT5G52410.2	Thale cress	plastid	35.9	45.99
AT5G23890.1	Thale cress	plastid	44.31	45.67
CDX87153	Canola	plastid	42.05	45.35
Bra026478.1-P	Field mustard	plastid	41.44	45.34
CDX88055	Canola	plastid	42.97	44.96
CDX80394	Canola	plastid	42.97	44.91
Bra009713.1-P	Field mustard	plastid	42.77	44.74
VIT_16s0050g00600.t01	Wine grape	plastid	49.23	44.49
Os03t0862100-01	Rice	plastid	38.97	41.39
Zm00001d020493_P001	Maize	cytosol	17.33	41.32
TraesCS5D01G563800.1	Wheat	golgi	37.54	41.12
TraesCS5B01G572300.1	Wheat	plastid	38.15	40.92
GSMUA_Achr5P12350_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	38.26	40.41
GSMUA_Achr11P...	Banana	plastid	39.69	40.19
HORVU5Hr1G124610.7	Barley	mitochondrion	38.87	40.02
TraesCS7B01G000400.2	Wheat	plastid	38.05	39.94
EER93049	Sorghum	plastid	37.54	38.73
Zm00001d034935_P007	Maize	plastid	37.23	35.8
KRH75517	Soybean	plastid	16.0	29.16
KRH70626	Soybean	plastid	15.49	28.17

Protein Annotations

EMBL:ACUP02010216	EnsemblPlants:KRH08938	EnsemblPlantsGene:GLYMA_16G182200	EntrezGene:100810148	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR001119	InterPro:SLH_dom	ncoils:Coil	PANTHER:PTHR33740	PANTHER:PTHR33740:SF3
PFscan:PS51272	ProteinID:KRH08938	ProteinID:KRH08938.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0003DEC08F
UniProt:A0A0R0FS66	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:34297608..34303628

Molecular Weight (calculated)

106764.0 Da

IEP (calculated)

4.414

GRAVY (calculated)

-0.469

Length

975 amino acids

Sequence
(BLAST)

001: MASLTCSPTS LQLRLALAAP KFPHTPQLRM RNFKLNRVRP LRAAQDGGPG PGPKLDGFSG WSDTDAEQRP NNAPKKESYG GSLLSGVVGV GVAGVLLLSG
101: LTFAALSLGK QTGSRPEQHM KPLTSQQEEL LSSDDHNNEI TEQGNVDNTV EQGNGKMEGQ IHISGDYSSA ESSNFYSDNS IVDDSDIGSQ LIYDSKNPSD
201: GVDDATKHIS VQEDLQDVSA FDNKLVFASE SPVPLESENT VDSFNAYGFR DFDSNPNVDT VESTPNLKEN LFNVDPGDVP NYDDAKPLHL NTEQHDEITS
301: SSGSVSFGFP ETYSSSGADN ETGIVSVVVI SELNNMISDP KFFNEAGQEN ILSALKNENL DLNKIPQVSA EGNEPSFEER SIPGNDLFEK SSISTSANTL
401: VDEQVRNDNY EVDEVKSESS NSGSFFSVPG IPAPLVVSTA VKVLPGKILV PAAVDQAQGQ ALAALQVLKV IEPDVQPSDL CTRREYARWL VSASSALSRS
501: TVSKVYPAMY IDNATELAFD DVTPEDPDFS SIQGLAEAGL IESRLSRRDI QLFGDGDDSP FYFSPESPLS RQDLVSWKMA LQKRQLPEAD SKVLYQLSGF
601: IDTDKIHPNA CPALVADLSA GEQGIIALAF GYTRLFQPDK PVTKAQAAMA LATGDASEIV SEELARIEAE SIAENAVAAH SALVAQVEKD INASFEQELF
701: IEREKISAVE RMAEEARLEL ERLRAEREED NLALTKERAA IESEMEVFSK LRHEVEDQLQ SLMSDKVEIA HEKERISKLR EKAEVENNEI GRLQYELEVE
801: RKALSMARAW AEDEAKRVRE QAIALEEARD RWERHGIKVV VDDDLRKEAS AGVTWLNASE QVSVQGTVDR AESLLDKLKQ MAADIRGKSR DTLHKIIHVV
901: SQFISKLREW ACKTGKQAEE FGEAAISKVG KSVSELQQNA LEVGIGIKEG AKRVAGDCRE GVEKITQKFT QKFKT

Best Arabidopsis Sequence Match ( AT5G23890.1 )
(BLAST)

001: MASATATWTP TSLQLRLALS SGVRRKSPAV YLRPSRLARK SGYGIVCVSQ KPEVDAWTGS DSSKSSADNL AGWDDSDNDD KKSSRVKKKS LIEGVVGAGV
101: AGIILFLGLS YAAASFSKRT KKQEMHSLTS QQESMIQSSD EISSDEIKVA NSEESNLKDE DKSIESNDVA QKSDEGSGED KLLGKETSSF DGVMTDEADA
201: TESIPQNTPE ADLMVNAETD PETAESEKII SESKSLLDSS TEPILLDAES SNLVGVENTN SEDPESLLNT EPTNVSDLEN HVNSQKEDSL SSLSGIDAYA
301: ASGTVTELPE VSSQLDSTSK PQIVPLNDTE TAFATAEELS EVNGTPEYFE TSDWSSISDI DTTKELESSK SPVPESTDGS KDELNIYSQD ELDDNRMLLE
401: IPSGGSAFSS AGIPAPFMSV IVNPGKILVP VAADQIQCQA FAALQVLKVI ETDTQPSDLC TRREYARWLI SASSALSRNT TSKVYPAMYI ENVTELAFDD
501: ITPEDPDFSS IQGLAEAGLI ASKLSNRDLL DDVEGTFLFS PESLLSRQDL ISWKMALEKR QLPEADKKML YKLSGFIDID KINPDAWPSI IADLSTGEQG
601: IAALAFGCTR LFQPHKPVTK GQAAIALSSG EASDIVSEEL ARIEAESMAE KAVSAHNALV AEVEKDVNAS FEKELSMERE KIEAVEKMAE LAKVELEQLR
701: EKREEENLAL VKERAAVESE MEVLSRLRRD AEEKLEDLMS NKAEITFEKE RVFNLRKEAE EESQRISKLQ YELEVERKAL SMARSWAEEE AKKAREQGRA
801: LEEARKRWET NGLRVVVDKD LQETSSRETE QSIVLNEMER SSVEETERRA KTLMDKLKEM AGTVSGKSRE VIFTVMEKIR LWITVLKEYA VNLGKRAGEM
901: RDAAIVRAKG AAADVEQGTV QVSDKVKKMA EECRDGVGKI SQRFKT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.