Factsheet for GSMUA_Achr5P12350_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041148_P001	Maize	cytosol	25.89	66.76
Solyc06g036040.1.1	Tomato	plastid	16.9	56.32
Solyc06g036030.1.1	Tomato	cytosol	7.58	53.03
PGSC0003DMT400076923	Potato	golgi, mitochondrion	25.14	50.99
GSMUA_Achr11P...	Banana	plastid	46.05	44.13
CDY27070	Canola	plastid	34.13	43.39
CDX91640	Canola	plastid	33.91	43.11
AT5G52410.2	Thale cress	plastid	35.43	42.97
Bra022589.1-P	Field mustard	plastid	33.59	42.64
TraesCS5B01G572300.1	Wheat	plastid	41.39	42.02
TraesCS5D01G563800.1	Wheat	golgi	40.52	42.02
Os03t0862100-01	Rice	plastid	41.6	41.83
Zm00001d020493_P001	Maize	cytosol	18.31	41.32
HORVU5Hr1G124610.7	Barley	mitochondrion	42.15	41.08
KRH38456	Soybean	plastid	39.11	40.93
TraesCS7B01G000400.2	Wheat	plastid	41.17	40.9
EER93049	Sorghum	plastid	41.39	40.42
Bra026478.1-P	Field mustard	plastid	37.16	38.5
PGSC0003DMT400040825	Potato	plastid	39.11	38.28
CDY16870	Canola	plastid	37.59	38.26
KRH08938	Soybean	plastid	40.41	38.26
CDX80394	Canola	plastid	38.46	38.05
CDX87153	Canola	plastid	37.16	37.94
CDX88055	Canola	plastid	38.24	37.88
Bra009713.1-P	Field mustard	plastid	38.14	37.77
Solyc03g025530.2.1	Tomato	plastid	38.35	37.54
AT5G23890.1	Thale cress	plastid	37.81	36.89
Zm00001d034935_P007	Maize	plastid	40.52	36.88
KRH35286	Soybean	plastid	37.38	36.66
KRG91542	Soybean	plastid	27.84	36.66
VIT_16s0050g00600.t01	Wine grape	plastid	41.82	35.77
GSMUA_Achr2P07070_001	Banana	extracellular, golgi	9.64	27.3
GSMUA_Achr2P07080_001	Banana	endoplasmic reticulum	7.58	26.12

Protein Annotations

EnsemblPlants:GSMUA_Achr5P12350_001	EnsemblPlants:GSMUA_Achr5T12350_001	EnsemblPlantsGene:GSMUA_Achr5G12350_001	InterPro:IPR001119	InterPro:SLH_dom	ncoils:Coil
PANTHER:PTHR33740	PANTHER:PTHR33740:SF3	PFAM:PF00395	PFscan:PS51272	SEG:seg	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI00029483B5	UniProt:M0SXW4	MapMan:35.2	:	:

Description

oxidoreductase/ transition metal ion binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G12350_001]

Coordinates

chr5:-:8869271..8875827

Molecular Weight (calculated)

101831.0 Da

IEP (calculated)

4.370

GRAVY (calculated)

-0.367

Length

923 amino acids

Sequence
(BLAST)

001: MLGAWLAGVL FAAGVTFATL SIVNKNASGA KQQVEPLASE QEILMSSVDA SEKDNRVGEV SNVVTIGEES IINDRNEDNE TGTSENFTPT NVNGDVSESR
101: YGDMQDLESS LSENIKSVGE GVIEIKRAST LDDLEVAKNV DNLPLFAGLS NSTHELPTYE DGFSHETSKS DDLGCATTFD MLESDIGKDV NADGTVTLVG
201: LTSVNTASTN AISNNLEETI NSNSETPSQF LGEFESQVPS NSITPDAKRI DSDEIDYQFS FEDVVANVSL LKDQDIEQNN MLQLPAKDCT ECPIVHDKNE
301: TVPIEKLFDL VPDHSEEQML QFDSISSAGG HNLNDSDLAS VQSVVVSTDP TKKEPDLKCD NETERNSLFE SLLPKKSFSH SGIPAPSLVY AAQQVPPGKI
401: LVPAFVDQVQ GHALAALQVL KVIEVDAQPG DLCTRREYAR WLVTASNVFS RNTFSKVYPA MYIENLTELA FDDVTPKDPD FPFIQGLAEA GLISSKLSRS
501: DLDVSVNILD DYVLFSPDSP LSRQDLISWK MALERRQLPE VDKNHLYQCT GYIDVDKINP DAWPALIADF AGGEQGITAL AFGYTRLFQP DKPVTKAQAA
601: IAIATGDAAE VVGEELARIE AESLAETAVN AHTTLVAQVE KDLNASFEEE LAKERQKTKD LEKLAEEARL ELNRLRTQRE EEKNALITSH ATVESEMEVL
701: SRLRHEVEEQ LQNLMSNKLE ISFERDRMNK LRKEVESENQ VIIRLQYELE VERKALIMAR SWAEEEAKRA REQAKALEEA RERWERHGIK IVVDGDLQDD
801: ASIGTTWLIA GDQPPVDETI GRGETLVKKL KEMAAEMKHR SSVTIEKIIQ RIVMIISALK QWVSVASNHA TELRIAGISK AKNAMIEFKE SASGFSLVIV
901: DKARRVVADC KGSVGKISQK FKA

Best Arabidopsis Sequence Match ( AT5G23890.2 )
(BLAST)

001: MHSLTSQQES MIQSSDEISS DEIKVANSEE SNLKDEDKSI ESNDVAQKSD EGSGEDKLLG KETSSFDGVM TDEADATESI PQNTPEADLM VNAETDPETA
101: ESEKIISESK SLLDSSTEPI LLDAESSNLV GVENTNSEDP ESLLNTEPTN VSDLENHVNS QKEDSLSSLS GIDAYAASGT VTELPEVSSQ LDSTSKPQIV
201: PLNDTETAFA TAEELSEVNG TPEYFETSDW SSISDIDTTK ELESSKSPVP ESTDGSKDEL NIYSQDELDD NRMLLEIPSG GSAFSSAGIP APFMSVIVNP
301: GKILVPVAAD QIQCQAFAAL QVLKVIETDT QPSDLCTRRE YARWLISASS ALSRNTTSKV YPAMYIENVT ELAFDDITPE DPDFSSIQGL AEAGLIASKL
401: SNRDLLDDVE GTFLFSPESL LSRQDLISWK MALEKRQLPE ADKKMLYKLS GFIDIDKINP DAWPSIIADL STGEQGIAAL AFGCTRLFQP HKPVTKGQAA
501: IALSSGEASD IVSEELARIE AESMAEKAVS AHNALVAEVE KDVNASFEKE LSMEREKIEA VEKMAELAKV ELEQLREKRE EENLALVKER AAVESEMEVL
601: SRLRRDAEEK LEDLMSNKAE ITFEKERVFN LRKEAEEESQ RISKLQYELE VERKALSMAR SWAEEEAKKA REQGRALEEA RKRWETNGLR VVVDKDLQET
701: SSRETEQSIV LNEMERSSVE ETERRAKTLM DKLKEMAGTV SGKSREVIFT VMEKIRLWIT VLKEYAVNLG KRAGEMRDAA IVRAKGAAAD VEQGTVQVSD
801: KVKKMAEECR DGVGKISQRF KT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.