CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91542	Soybean	plastid	58.77	78.89
KRH38456	Soybean	plastid	54.3	57.94
KRH08938	Soybean	plastid	59.62	57.54
Zm00001d041148_P001	Maize	cytosol	21.68	56.98
Solyc06g036030.1.1	Tomato	cytosol	7.76	55.3
Solyc06g036040.1.1	Tomato	plastid	15.2	51.62
PGSC0003DMT400076923	Potato	golgi, mitochondrion	24.23	50.11
PGSC0003DMT400040825	Potato	plastid	45.06	44.96
Solyc03g025530.2.1	Tomato	plastid	44.31	44.22
CDY27070	Canola	plastid	34.01	44.08
CDX91640	Canola	plastid	33.9	43.94
Bra022589.1-P	Field mustard	plastid	33.37	43.19
AT5G52410.2	Thale cress	plastid	34.33	42.44
CDY16870	Canola	plastid	40.17	41.68
CDX80394	Canola	plastid	41.23	41.59
CDX87153	Canola	plastid	39.85	41.48
AT5G23890.1	Thale cress	plastid	41.66	41.44
Bra009713.1-P	Field mustard	plastid	41.02	41.42
Bra026478.1-P	Field mustard	plastid	39.11	41.3
CDX88055	Canola	plastid	40.81	41.2
VIT_16s0050g00600.t01	Wine grape	plastid	45.16	39.39
TraesCS5D01G563800.1	Wheat	golgi	35.49	37.53
GSMUA_Achr5P12350_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	36.66	37.38
GSMUA_Achr11P...	Banana	plastid	37.83	36.97
Zm00001d020493_P001	Maize	cytosol	16.05	36.92
TraesCS5B01G572300.1	Wheat	plastid	35.07	36.3
Os03t0862100-01	Rice	plastid	35.39	36.27
HORVU5Hr1G124610.7	Barley	mitochondrion	36.03	35.8
TraesCS7B01G000400.2	Wheat	plastid	35.07	35.52
EER93049	Sorghum	plastid	35.18	35.03
Zm00001d034935_P007	Maize	plastid	34.64	32.15
KRH75517	Soybean	plastid	15.41	27.1
KRH70626	Soybean	plastid	15.2	26.68

Protein Annotations

EMBL:ACUP02006662	EnsemblPlants:KRH35286	EnsemblPlantsGene:GLYMA_10G234000	EntrezGene:100801281	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR33740	PANTHER:PTHR33740:SF3	ProteinID:KRH35286	ProteinID:KRH35286.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000233C922	UniProt:K7LL18	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr10:-:46297124..46302217

Molecular Weight (calculated)

104202.0 Da

IEP (calculated)

4.444

GRAVY (calculated)

-0.456

Length

941 amino acids

Sequence
(BLAST)

001: MASITAPNSL QIRLAFSPSN STKFPILLHS RFPHFDRRRI RLFCVANNEN GSDNVLIRVG SDGSPNSEVK KNKSNNGGVV GVGVAGILLL SGLAFAALFV
101: SRRNSARQMK PLTTHQEQEV LLSSDDCNDK IEQVNSGTME EQGNGNVEGR IDVSRDCSST EYDKIPNSHR IIDDSNAGSQ LVYDIHNKDN DSDAMKHISV
201: QEELQIESAA DEESVLPEGA MVLNGSESEN PVDSFDSSTA VDSQNSITEL KENPSFVEPK KVSNFDAEPL PVISEEQDEI TDSSGNRSSG IVADNETVLV
301: NIAVSTQSNK TTSFPAVIPE DWEESAQSVS TKENLDLNNM PQVLHQSSLA EQSFSENDLF TKSFVSSIDA FLDEQVKNDN NEVDICRSET SNFGAFYSAP
401: GIPAPSAVSS VVQVLPGKVL VPAAVDQVQG QALAALQTLK VIEPDVQPSD LCTRREYARW LVSASSALSR KTISKVYPAM FVDSVTELAF DDITPEDPDF
501: SFIQGLAEAG LIESRLSRCY DRPLSTNEDY GPFYFSPESP LSRQDLVTWK IDLEKRQLPE ADRKMLCQLS GFIDTDKIHS DACPELVADV SAGEHGIIAL
601: AFGYTRLFQP HKPVTKAQAA IALAAGDAFD IVNEELACFE SESMDENAVA SHSALVAQVE KDINASLEQK LSIEREKINA VERMAEEARC ELERLRAERE
701: EERISLIEER AAIESERNVF SRLKHEVEDQ LQNLISDKVE IAYEKDRISK LRELAEVQNK EITQLQYELE VERKALSMAR AWAEDEAKRV SEHTLALERA
801: RDSWERNESK AAVDDFHEDL AGVTLLNTEE QLSVQDTVDR AENLLDKLKK MAVEVGGRAR DMIDKIIHII SQFVSRLREW ACKTGKQAEE LKQSAISKAG
901: KSAHEVQQSA LEFGFTIKEE AKRVAGDCRE GVEKLTQKFK P

Best Arabidopsis Sequence Match ( AT5G23890.1 )
(BLAST)

001: MASATATWTP TSLQLRLALS SGVRRKSPAV YLRPSRLARK SGYGIVCVSQ KPEVDAWTGS DSSKSSADNL AGWDDSDNDD KKSSRVKKKS LIEGVVGAGV
101: AGIILFLGLS YAAASFSKRT KKQEMHSLTS QQESMIQSSD EISSDEIKVA NSEESNLKDE DKSIESNDVA QKSDEGSGED KLLGKETSSF DGVMTDEADA
201: TESIPQNTPE ADLMVNAETD PETAESEKII SESKSLLDSS TEPILLDAES SNLVGVENTN SEDPESLLNT EPTNVSDLEN HVNSQKEDSL SSLSGIDAYA
301: ASGTVTELPE VSSQLDSTSK PQIVPLNDTE TAFATAEELS EVNGTPEYFE TSDWSSISDI DTTKELESSK SPVPESTDGS KDELNIYSQD ELDDNRMLLE
401: IPSGGSAFSS AGIPAPFMSV IVNPGKILVP VAADQIQCQA FAALQVLKVI ETDTQPSDLC TRREYARWLI SASSALSRNT TSKVYPAMYI ENVTELAFDD
501: ITPEDPDFSS IQGLAEAGLI ASKLSNRDLL DDVEGTFLFS PESLLSRQDL ISWKMALEKR QLPEADKKML YKLSGFIDID KINPDAWPSI IADLSTGEQG
601: IAALAFGCTR LFQPHKPVTK GQAAIALSSG EASDIVSEEL ARIEAESMAE KAVSAHNALV AEVEKDVNAS FEKELSMERE KIEAVEKMAE LAKVELEQLR
701: EKREEENLAL VKERAAVESE MEVLSRLRRD AEEKLEDLMS NKAEITFEKE RVFNLRKEAE EESQRISKLQ YELEVERKAL SMARSWAEEE AKKAREQGRA
801: LEEARKRWET NGLRVVVDKD LQETSSRETE QSIVLNEMER SSVEETERRA KTLMDKLKEM AGTVSGKSRE VIFTVMEKIR LWITVLKEYA VNLGKRAGEM
901: RDAAIVRAKG AAADVEQGTV QVSDKVKKMA EECRDGVGKI SQRFKT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.