CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16870	Canola	plastid	84.18	83.9
CDX88055	Canola	plastid	72.35	70.17
CDX80394	Canola	plastid	72.23	69.99
AT5G23890.1	Thale cress	plastid	69.14	66.07
Zm00001d041148_P001	Maize	cytosol	22.57	56.98
Solyc06g036030.1.1	Tomato	cytosol	8.19	56.06
Solyc06g036040.1.1	Tomato	plastid	15.93	51.99
PGSC0003DMT400076923	Potato	golgi, mitochondrion	25.55	50.77
CDY27070	Canola	plastid	38.38	47.8
CDX91640	Canola	plastid	38.38	47.8
KRH38456	Soybean	plastid	43.58	44.67
Solyc03g025530.2.1	Tomato	plastid	44.91	43.05
PGSC0003DMT400040825	Potato	plastid	44.58	42.74
KRH08938	Soybean	plastid	45.35	42.05
KRG91542	Soybean	plastid	31.08	40.09
KRH35286	Soybean	plastid	41.48	39.85
TraesCS5D01G563800.1	Wheat	golgi	37.83	38.43
TraesCS5B01G572300.1	Wheat	plastid	37.61	37.4
GSMUA_Achr5P12350_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	37.94	37.16
TraesCS7B01G000400.2	Wheat	plastid	38.16	37.14
Os03t0862100-01	Rice	plastid	37.61	37.04
Zm00001d020493_P001	Maize	cytosol	16.48	36.43
VIT_16s0050g00600.t01	Wine grape	plastid	43.14	36.14
GSMUA_Achr11P...	Banana	plastid	38.27	35.93
HORVU5Hr1G124610.7	Barley	mitochondrion	37.39	35.69
EER93049	Sorghum	plastid	36.84	35.24
Zm00001d034935_P007	Maize	plastid	37.28	33.23
CDY04174	Canola	plastid	16.48	27.59
CDY59871	Canola	plastid	16.26	26.97

Protein Annotations

EnsemblPlants:CDX87153	EnsemblPlantsGene:GSBRNA2T00146072001	GO:A0A078DIQ2	InterPro:IPR001119	InterPro:SLH_dom	ncoils:Coil
PANTHER:PTHR33740	PANTHER:PTHR33740:SF6	PFscan:PS51272	ProteinID:CDX87153	ProteinID:CDX87153.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0004EC1D83	MapMan:35.2	:	:	:

Description

BnaC09g04680D

Coordinates

chrLK031849:-:805202..810365

Molecular Weight (calculated)

99087.0 Da

IEP (calculated)

4.477

GRAVY (calculated)

-0.460

Length

904 amino acids

Sequence
(BLAST)

001: MTSASATCTP TSLQLRLALS SRVRRKPHSV YLLPSRFASK PGLVIVCVSQ RTGSDSSKPP ADGLAGWDDS GNDVKSSRAK KKSFIQGVVG VGVAGIVLVA
101: GLSYAVASFN KRSNPNGNSI LSAGVKQESV LLSSHDTPSD EGKVANSEET NLKEDKSLES DGIGQQGDEA SGEDKILGTE DSSFDGTDAT ENISSQSDPE
201: TPESEKIIYE SRSLVDSSSE VIDSQSSNLA GADNPTSEDP DSLPNTEATS VSDLEIQANG QKIDTVAVVV SVFSQSDSTS DPHTVPLDDM GTAFPTVTED
301: LSEVNGTPEY LAAESISSVS DIDTAKERKS LETPWPESTY WSKNERDMNI QEEFGDSKPP WETPNGGSAF SSAGIPAPSI SFQVNPGKVL VTAAADQAQC
401: QAFAALQILK VIETDTQPSD LCTRREYARW LVSASSALSR NTTSKVYPAM YIENVTELAF DDITPGDPDF PSIQGLAEAG LITSKLSNRD LLKDVEGPFL
501: FSPDSLLSRQ DLIRWKMALE KRQLPEADKK MLYKLSGFID IDKINLDAWP AIIADLSSGE QGIASLAFGF TRFFQPHKPV TKAQAAIALS NGEASDIVSE
601: ELVRIEAESA AEKAVSAHDA LVAEVEKDIN ASFEKELYIE REKIEVIERM AEQVKVELDQ LREKREEENL ALVKERAAVE SEMEVLSWLR REAEEKLEAL
701: MRNKAEISFE KEKVSSLRKD VEEESQRITK LQYELEVERK ALSMARSWAE EEGKRAREQA RALEEARKRW ETNGLRVIVD KDLQEDVEQS VLLNTVEPSS
801: VYSTEERPQT LIGKLKEMAY TVGGKSREVI FIVMEKIRLW IMVLKEYVES LGKRVGEMRE AAIVSAKGAV KEVEKGTAQV GDKVKRMAEE CRDGVGKISQ
901: RFKT

Best Arabidopsis Sequence Match ( AT5G23890.1 )
(BLAST)

001: MASATATWTP TSLQLRLALS SGVRRKSPAV YLRPSRLARK SGYGIVCVSQ KPEVDAWTGS DSSKSSADNL AGWDDSDNDD KKSSRVKKKS LIEGVVGAGV
101: AGIILFLGLS YAAASFSKRT KKQEMHSLTS QQESMIQSSD EISSDEIKVA NSEESNLKDE DKSIESNDVA QKSDEGSGED KLLGKETSSF DGVMTDEADA
201: TESIPQNTPE ADLMVNAETD PETAESEKII SESKSLLDSS TEPILLDAES SNLVGVENTN SEDPESLLNT EPTNVSDLEN HVNSQKEDSL SSLSGIDAYA
301: ASGTVTELPE VSSQLDSTSK PQIVPLNDTE TAFATAEELS EVNGTPEYFE TSDWSSISDI DTTKELESSK SPVPESTDGS KDELNIYSQD ELDDNRMLLE
401: IPSGGSAFSS AGIPAPFMSV IVNPGKILVP VAADQIQCQA FAALQVLKVI ETDTQPSDLC TRREYARWLI SASSALSRNT TSKVYPAMYI ENVTELAFDD
501: ITPEDPDFSS IQGLAEAGLI ASKLSNRDLL DDVEGTFLFS PESLLSRQDL ISWKMALEKR QLPEADKKML YKLSGFIDID KINPDAWPSI IADLSTGEQG
601: IAALAFGCTR LFQPHKPVTK GQAAIALSSG EASDIVSEEL ARIEAESMAE KAVSAHNALV AEVEKDVNAS FEKELSMERE KIEAVEKMAE LAKVELEQLR
701: EKREEENLAL VKERAAVESE MEVLSRLRRD AEEKLEDLMS NKAEITFEKE RVFNLRKEAE EESQRISKLQ YELEVERKAL SMARSWAEEE AKKAREQGRA
801: LEEARKRWET NGLRVVVDKD LQETSSRETE QSIVLNEMER SSVEETERRA KTLMDKLKEM AGTVSGKSRE VIFTVMEKIR LWITVLKEYA VNLGKRAGEM
901: RDAAIVRAKG AAADVEQGTV QVSDKVKKMA EECRDGVGKI SQRFKT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.