CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041148_P001	Maize	cytosol	33.86	89.39
Zm00001d034935_P007	Maize	plastid	82.65	77.02
Os03t0862100-01	Rice	plastid	59.26	61.0
TraesCS5D01G563800.1	Wheat	golgi	56.61	60.11
TraesCS5B01G572300.1	Wheat	plastid	56.4	58.64
TraesCS7B01G000400.2	Wheat	plastid	55.98	56.94
HORVU5Hr1G124610.7	Barley	mitochondrion	54.71	54.59
Solyc06g036040.1.1	Tomato	plastid	15.66	53.43
Zm00001d020493_P001	Maize	cytosol	22.86	52.81
Solyc06g036030.1.1	Tomato	cytosol	7.3	52.27
PGSC0003DMT400076923	Potato	golgi, mitochondrion	22.75	47.25
CDY27070	Canola	plastid	32.06	41.74
GSMUA_Achr5P12350_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	40.42	41.39
CDX91640	Canola	plastid	31.75	41.32
Bra022589.1-P	Field mustard	plastid	31.53	40.99
KRH38456	Soybean	plastid	38.2	40.93
AT5G52410.2	Thale cress	plastid	32.8	40.74
GSMUA_Achr11P...	Banana	plastid	38.94	38.21
PGSC0003DMT400040825	Potato	plastid	37.57	37.65
KRH08938	Soybean	plastid	38.73	37.54
Solyc03g025530.2.1	Tomato	plastid	37.04	37.12
CDX87153	Canola	plastid	35.24	36.84
CDX88055	Canola	plastid	36.08	36.59
Bra009713.1-P	Field mustard	plastid	36.08	36.59
CDY16870	Canola	plastid	35.03	36.49
CDX80394	Canola	plastid	35.77	36.23
Bra026478.1-P	Field mustard	plastid	33.97	36.03
KRG91542	Soybean	plastid	26.56	35.81
AT5G23890.1	Thale cress	plastid	35.24	35.2
KRH35286	Soybean	plastid	35.03	35.18
VIT_16s0050g00600.t01	Wine grape	plastid	37.35	32.72
KXG19937	Sorghum	mitochondrion	14.6	24.73

Protein Annotations

EnsemblPlants:EER93049	EnsemblPlantsGene:SORBI_3001G000800	EntrezGene:8059227	ncoils:Coil	PANTHER:PTHR33740	PANTHER:PTHR33740:SF3
ProteinID:EER93049	ProteinID:EER93049.1	RefSeq:XP_002466051.1	SEG:seg	unigene:Sbi.5256	UniParc:UPI0001A8274D
UniProt:C5WRT7	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:62892..69306

Molecular Weight (calculated)

103099.0 Da

IEP (calculated)

4.386

GRAVY (calculated)

-0.420

Length

945 amino acids

Sequence
(BLAST)

001: MPAPVAAYPA KMACCLQLHL LRRSAPAPLP ARVLLLLSTP RLRLRPVRAS PGPGSSPPNS FAGWSSDSAD DGADKSTLGF GPAGGLLGPG LAAFFFLAGL
101: TFAAVSIRSS GNHAAAKMQN LPAETAATES YSDYHSHKED DAISVREEDA QASLPTDWEE NNDSLDETKS TDEFLAPLLQ SNEEVPGVQA EHEVGHPLQN
201: TEPVTNGNHL VGEEVQQFDN LIASDGNQNP ASPPLPISSE YAQVSFAPSS TLDAADPSEG IPNVEETSDL KMALPENEHL DETLTSDAMV LDSDGVVLIQ
301: DIADSAVAAA FHPEDKGVEQ NPQTHDKDEF SPSGLPDYME HVSAEEMHPL GSNELSMATG TSEPGDGEET IVEDLYERES ELENQNKPFK STPPDQYFSS
401: PGIPAPSIVS TASQVPVGQI VVPASVDPTQ ENAIAALQIL KVIEPSARAG DLCTRREYAR WLVVASNCLS RNTFSKVYPA MYIDNVTELA FDDVTPEDPD
501: FPFIQGLAEA GLISSKLSRS DMNIPEDVHD NHILFSPESP LSRQDLVSWK MVLDRRQLPE VDRNCLFKVS GYIDIDKINT AAWPALVADL GAGDQSITAL
601: SFGFTRLFQP NKPVTKGQAA LAISTGDSGE VVLEEVARIE AEKIAEAAVN AHGALVAQVE KDLNARFERE LKEEREKVET LEKLAEEARM ELDRLREERE
701: EEKNILLRGR AAVESEMEVL LKLRSEVEEQ LQNVLSKKVE VSFEKSRIEK LQKEIENDNL AVVQLQYELE VERKALSLAR AWAEEEAKKA REHARALEDA
801: RNQWERQGIK VVVEGGLQDD ASAGVTWANA GKEHPVDEVI NRAESLLEKL KSMSAEMKVR SRGALERVMQ HVRSFIASLK QQAADARQWC SEFGASAASK
901: ALMVSAEVQG SVSAFGATLG DKSKRVMEEC KDGLEKFSHR FKTSD

Best Arabidopsis Sequence Match ( AT5G23890.2 )
(BLAST)

001: MHSLTSQQES MIQSSDEISS DEIKVANSEE SNLKDEDKSI ESNDVAQKSD EGSGEDKLLG KETSSFDGVM TDEADATESI PQNTPEADLM VNAETDPETA
101: ESEKIISESK SLLDSSTEPI LLDAESSNLV GVENTNSEDP ESLLNTEPTN VSDLENHVNS QKEDSLSSLS GIDAYAASGT VTELPEVSSQ LDSTSKPQIV
201: PLNDTETAFA TAEELSEVNG TPEYFETSDW SSISDIDTTK ELESSKSPVP ESTDGSKDEL NIYSQDELDD NRMLLEIPSG GSAFSSAGIP APFMSVIVNP
301: GKILVPVAAD QIQCQAFAAL QVLKVIETDT QPSDLCTRRE YARWLISASS ALSRNTTSKV YPAMYIENVT ELAFDDITPE DPDFSSIQGL AEAGLIASKL
401: SNRDLLDDVE GTFLFSPESL LSRQDLISWK MALEKRQLPE ADKKMLYKLS GFIDIDKINP DAWPSIIADL STGEQGIAAL AFGCTRLFQP HKPVTKGQAA
501: IALSSGEASD IVSEELARIE AESMAEKAVS AHNALVAEVE KDVNASFEKE LSMEREKIEA VEKMAELAKV ELEQLREKRE EENLALVKER AAVESEMEVL
601: SRLRRDAEEK LEDLMSNKAE ITFEKERVFN LRKEAEEESQ RISKLQYELE VERKALSMAR SWAEEEAKKA REQGRALEEA RKRWETNGLR VVVDKDLQET
701: SSRETEQSIV LNEMERSSVE ETERRAKTLM DKLKEMAGTV SGKSREVIFT VMEKIRLWIT VLKEYAVNLG KRAGEMRDAA IVRAKGAAAD VEQGTVQVSD
801: KVKKMAEECR DGVGKISQRF KT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.