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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:nucleus
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88055 Canola plastid 70.4 71.46
Bra009713.1-P Field mustard plastid 69.98 71.03
CDY16870 Canola plastid 68.08 71.0
CDX80394 Canola plastid 69.34 70.31
Bra026478.1-P Field mustard plastid 65.33 69.36
CDX87153 Canola plastid 66.07 69.14
Zm00001d041148_P001 Maize cytosol 22.3 58.94
Solyc06g036040.1.1 Tomato plastid 16.07 54.87
Solyc06g036030.1.1 Tomato cytosol 7.61 54.55
PGSC0003DMT400076923 Potato golgi, mitochondrion 25.26 52.53
AT5G52410.2 Thale cress plastid 37.84 47.04
KRH38456 Soybean plastid 43.13 46.26
PGSC0003DMT400040825 Potato plastid 45.77 45.92
Solyc03g025530.2.1 Tomato plastid 45.67 45.81
KRH08938 Soybean plastid 45.67 44.31
KRH35286 Soybean plastid 41.44 41.66
KRG91542 Soybean plastid 30.34 40.94
Zm00001d020493_P001 Maize cytosol 16.7 38.63
VIT_16s0050g00600.t01 Wine grape plastid 43.66 38.28
GSMUA_Achr11P... Banana plastid 38.9 38.21
TraesCS5D01G563800.1 Wheat golgi 35.73 37.98
Os03t0862100-01 Rice plastid 36.79 37.91
GSMUA_Achr5P12350_001 Banana endoplasmic reticulum, plasma membrane, vacuole 36.89 37.81
TraesCS5B01G572300.1 Wheat plastid 36.26 37.73
TraesCS7B01G000400.2 Wheat plastid 36.05 36.71
HORVU5Hr1G124610.7 Barley mitochondrion 36.58 36.54
EER93049 Sorghum plastid 35.2 35.24
Zm00001d034935_P007 Maize plastid 36.58 34.12
AT3G25680.1 Thale cress plastid 16.49 27.96
Protein Annotations
MapMan:35.2EntrezGene:832454ProteinID:AED93229.1ArrayExpress:AT5G23890EnsemblPlantsGene:AT5G23890RefSeq:AT5G23890
TAIR:AT5G23890RefSeq:AT5G23890-TAIR-GEnsemblPlants:AT5G23890.1TAIR:AT5G23890.1Unigene:At.19700ProteinID:BAB10062.1
ncoils:CoilGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0009507GO:GO:0009535GO:GO:0009536GO:GO:0009579GO:GO:0009941GO:GO:0016020
GO:GO:0016021InterPro:IPR001119RefSeq:NP_197777.1PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0005052PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007131PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS51272
PANTHER:PTHR33740PANTHER:PTHR33740:SF6UniProt:Q9FF91InterPro:SLH_domTMHMM:TMhelixUniParc:UPI000009DA39
SEG:seg:::::
Description
GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
Coordinates
chr5:+:8058580..8063286
Molecular Weight (calculated)
103932.0 Da
IEP (calculated)
4.328
GRAVY (calculated)
-0.519
Length
946 amino acids
Sequence
(BLAST)
001: MASATATWTP TSLQLRLALS SGVRRKSPAV YLRPSRLARK SGYGIVCVSQ KPEVDAWTGS DSSKSSADNL AGWDDSDNDD KKSSRVKKKS LIEGVVGAGV
101: AGIILFLGLS YAAASFSKRT KKQEMHSLTS QQESMIQSSD EISSDEIKVA NSEESNLKDE DKSIESNDVA QKSDEGSGED KLLGKETSSF DGVMTDEADA
201: TESIPQNTPE ADLMVNAETD PETAESEKII SESKSLLDSS TEPILLDAES SNLVGVENTN SEDPESLLNT EPTNVSDLEN HVNSQKEDSL SSLSGIDAYA
301: ASGTVTELPE VSSQLDSTSK PQIVPLNDTE TAFATAEELS EVNGTPEYFE TSDWSSISDI DTTKELESSK SPVPESTDGS KDELNIYSQD ELDDNRMLLE
401: IPSGGSAFSS AGIPAPFMSV IVNPGKILVP VAADQIQCQA FAALQVLKVI ETDTQPSDLC TRREYARWLI SASSALSRNT TSKVYPAMYI ENVTELAFDD
501: ITPEDPDFSS IQGLAEAGLI ASKLSNRDLL DDVEGTFLFS PESLLSRQDL ISWKMALEKR QLPEADKKML YKLSGFIDID KINPDAWPSI IADLSTGEQG
601: IAALAFGCTR LFQPHKPVTK GQAAIALSSG EASDIVSEEL ARIEAESMAE KAVSAHNALV AEVEKDVNAS FEKELSMERE KIEAVEKMAE LAKVELEQLR
701: EKREEENLAL VKERAAVESE MEVLSRLRRD AEEKLEDLMS NKAEITFEKE RVFNLRKEAE EESQRISKLQ YELEVERKAL SMARSWAEEE AKKAREQGRA
801: LEEARKRWET NGLRVVVDKD LQETSSRETE QSIVLNEMER SSVEETERRA KTLMDKLKEM AGTVSGKSRE VIFTVMEKIR LWITVLKEYA VNLGKRAGEM
901: RDAAIVRAKG AAADVEQGTV QVSDKVKKMA EECRDGVGKI SQRFKT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.