CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
endoplasmic reticulum 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08938	Soybean	plastid	89.46	80.92
Zm00001d041148_P001	Maize	cytosol	25.17	62.01
Solyc06g036040.1.1	Tomato	plastid	18.48	58.84
KRG91542	Soybean	plastid	44.67	56.21
Solyc06g036030.1.1	Tomato	cytosol	8.39	56.06
PGSC0003DMT400076923	Potato	golgi, mitochondrion	28.8	55.82
KRH35286	Soybean	plastid	57.94	54.3
CDX91640	Canola	plastid	40.02	48.62
PGSC0003DMT400040825	Potato	plastid	51.81	48.46
CDY27070	Canola	plastid	39.34	47.8
Solyc03g025530.2.1	Tomato	plastid	50.91	47.61
Bra022589.1-P	Field mustard	plastid	38.55	46.77
AT5G52410.2	Thale cress	plastid	40.02	46.39
CDY16870	Canola	plastid	45.01	43.77
CDX87153	Canola	plastid	44.67	43.58
VIT_16s0050g00600.t01	Wine grape	plastid	53.17	43.47
Bra009713.1-P	Field mustard	plastid	45.92	43.45
CDX88055	Canola	plastid	45.92	43.45
CDX80394	Canola	plastid	45.8	43.3
AT5G23890.1	Thale cress	plastid	46.26	43.13
Bra026478.1-P	Field mustard	plastid	43.42	42.99
TraesCS5D01G563800.1	Wheat	golgi	41.38	41.01
Zm00001d020493_P001	Maize	cytosol	18.82	40.59
TraesCS5B01G572300.1	Wheat	plastid	41.72	40.48
Os03t0862100-01	Rice	plastid	41.95	40.3
GSMUA_Achr11P...	Banana	plastid	43.2	39.56
TraesCS7B01G000400.2	Wheat	plastid	41.38	39.29
HORVU5Hr1G124610.7	Barley	mitochondrion	42.06	39.18
GSMUA_Achr5P12350_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	40.93	39.11
EER93049	Sorghum	plastid	40.93	38.2
Zm00001d034935_P007	Maize	plastid	39.8	34.62
KRH75517	Soybean	plastid	17.57	28.97
KRH70626	Soybean	plastid	17.35	28.54

Protein Annotations

EMBL:ACUP02005817	EnsemblPlants:KRH38456	EnsemblPlantsGene:GLYMA_09G136800	EntrezGene:100780360	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR33740	PANTHER:PTHR33740:SF3	ProteinID:KRH38456	ProteinID:KRH38456.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0006EDF05E	UniProt:A0A0R0IEU9	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr9:-:33861542..33867763

Molecular Weight (calculated)

96929.1 Da

IEP (calculated)

4.457

GRAVY (calculated)

-0.484

Length

882 amino acids

Sequence
(BLAST)

001: MASLTCTPTS LQLRLAFAAP KFPHPPHVRM RNFKLNRLRP LRAAQDGVSS EWAGPGPKLD GFSGWSDTDA EQRPNNAPKK DSYGGVVGVG VAGVLLLSGL
101: TFAALSLGKQ TGSRPEQHMK TLTTQQEELL SSDDHNDEIT EQGNVDSMVE QGNGKMEGSQ LIYDSKNPSD GVDDATKHIS VQEDLQDELA FGNKLVFASE
201: SPVPLESENT IDSFNAYGFR DFDSNPNVDT AESTANLKEN LFNVDPGDAP NYDDAKPLHL NTEQHDEITS SSGSVSAEGN EPSFEERSVP GNDLFEESSI
301: SSSVNTLVDE QVTNDNYEVD EVKSKSPNSG SFFSVPGIPA PSVVSASVQV LPGKVLVPAA VDQVQGQALA ALQVLKVIEP DVQPSDLCTR REYARWLVSA
401: SSALSRSTVS KVYPAMYIDN VTELAFDDVI PEDPDFSSIQ GLAEAGLIES RLSRRDIQLS AEEDDSPFYF SPESPLSRQD LVSWKMALEK RQLPEANRKV
501: LYQVSGFIDT DKIHPNACPA LVADLSSGEQ GIIALAFGYT RLFQPDKPVT KAQAAMALAT GDASEIVSEE LARIEAESVA ENAVAAHSAL VAQVEKDINA
601: SFEQELFIER EKISAVERMA EEARLELERL RAEREEDNLA LTKERAAIDS EMEVFSKLRH EVEDQLQSLM NDRVEIAHEK ERISKLREQA EVENKEICRL
701: QYELEVERKA LSMARAWAED EAKRVREQAI ALEEARDRWE RHGIKVVVDD DLRKEASAGV TWLNASEQVS VQGTVDRAES LLDKLKQMAA DIRGKSRDTL
801: DKIIHMVSQL ISKLREWACK TGKQAEEFGE AAISKVGKSA SELQLSALEV GSGIKEGAKR VAGDCREGVE KITQKFTQKF KT

Best Arabidopsis Sequence Match ( AT5G23890.1 )
(BLAST)

001: MASATATWTP TSLQLRLALS SGVRRKSPAV YLRPSRLARK SGYGIVCVSQ KPEVDAWTGS DSSKSSADNL AGWDDSDNDD KKSSRVKKKS LIEGVVGAGV
101: AGIILFLGLS YAAASFSKRT KKQEMHSLTS QQESMIQSSD EISSDEIKVA NSEESNLKDE DKSIESNDVA QKSDEGSGED KLLGKETSSF DGVMTDEADA
201: TESIPQNTPE ADLMVNAETD PETAESEKII SESKSLLDSS TEPILLDAES SNLVGVENTN SEDPESLLNT EPTNVSDLEN HVNSQKEDSL SSLSGIDAYA
301: ASGTVTELPE VSSQLDSTSK PQIVPLNDTE TAFATAEELS EVNGTPEYFE TSDWSSISDI DTTKELESSK SPVPESTDGS KDELNIYSQD ELDDNRMLLE
401: IPSGGSAFSS AGIPAPFMSV IVNPGKILVP VAADQIQCQA FAALQVLKVI ETDTQPSDLC TRREYARWLI SASSALSRNT TSKVYPAMYI ENVTELAFDD
501: ITPEDPDFSS IQGLAEAGLI ASKLSNRDLL DDVEGTFLFS PESLLSRQDL ISWKMALEKR QLPEADKKML YKLSGFIDID KINPDAWPSI IADLSTGEQG
601: IAALAFGCTR LFQPHKPVTK GQAAIALSSG EASDIVSEEL ARIEAESMAE KAVSAHNALV AEVEKDVNAS FEKELSMERE KIEAVEKMAE LAKVELEQLR
701: EKREEENLAL VKERAAVESE MEVLSRLRRD AEEKLEDLMS NKAEITFEKE RVFNLRKEAE EESQRISKLQ YELEVERKAL SMARSWAEEE AKKAREQGRA
801: LEEARKRWET NGLRVVVDKD LQETSSRETE QSIVLNEMER SSVEETERRA KTLMDKLKEM AGTVSGKSRE VIFTVMEKIR LWITVLKEYA VNLGKRAGEM
901: RDAAIVRAKG AAADVEQGTV QVSDKVKKMA EECRDGVGKI SQRFKT

Arabidopsis Description

GPI-anchored adhesin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF91]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.